Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Adeh_0225 |
Symbol | |
ID | 3886307 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-C |
Kingdom | Bacteria |
Replicon accession | NC_007760 |
Strand | + |
Start bp | 254791 |
End bp | 255933 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 637861743 |
Product | secretion protein HlyD |
Protein accession | YP_463439 |
Protein GI | 86156654 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.34961 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGAGAG CCACCGGACC TCGACGCGGA TGCAGGCTGC TCGGGCTGGC GCTCGCCGCG GCCGTAGCCC TCCCCGGCTG CAAGCGGGGC GGCGGCAGCA CCGCCGAGGC CGCGCAGGAG CAGCCGCCGG TCGCGCTCGC GCCGGAGAAC GTCGCGGTGG TGTCGTCCCG CCGGCTCCAG TCGGGCCCGG AGGTGGCCGG CACCCTGCAC GCCCGCCGCA CGGCCACGCT GCGCGCCGAG GTGGGCGGCG CGGTCGCCGA GGTCCGCGTC GAGGCGGGCG AGCGGGTGAA GGCAGGGCAG CTCCTCGCGC GGATCGACGC CTCGGCGCTC CAGGACGCGG TGCGGGCGGC GCGCTCCGCG GTGACCTCGG CGCAGAACGC GCTCCGCGTG GCGGAGTCGA GCGCGCGGCG CGCCCACACC CTGGCCCGCG AGGGCGCCAT GGCCGAGCAG GACGCCGAGC GCGCCGAGGC GCAGCTCGAG GCGGCGCGCG CGCAGGTGGA GGACGCGAAG GCCCGGCTCG CCGCGGCGGA GCAGCAGGCC GGCAAGACGG CGGTGCGCGC GCCCTTCGCC GGCGTCGTCT CGGAGCGGAA CGTCTCGTCG GGCGACGTGG TGTCCTCCGG CGCCGCGCTG TACACGGTGA TCGACCCCTC CCGCCTCCAG TTCGAGGGCT CGGTGCCGGC GGCGAGCGTG GGCGCGCTCG CGCCCGGCGC GCCGGTGGAC TTCGCGGTGA CCGGCTTCGG CGGCCGCCGC TTCGACGGGC ACATCGAGCG CGTGAACCCC GCGGTCGATC CCAGCACCGG CCAGGTGCGC GTCTACGTGG ACGTGCCGAA CGCCGACGGC CGGCTCCTGG CCGGCCTCTA CGCGCAGGGG CGGGTGGCGA GCCAGGCGAG CGAGGCCCTG GCCGCGCCGG CGACGGCGGT GGACGCGACC TCCACCCCGC CCACGGTCAT GAAGGTGCAG GACGGGAAGG TGCAGAAGGT GGCGGTCGAG ATCGCGCTCC GCGACGACGT GGCCGGTGCG GTGGGCTTCC GCTCCGGCGT GAAGCAGGGC GACGTGCTCG TGCTCGGCTC GGCGCGCGGT GCGCTCGCCG ACGGCACCCC GGTGCGCGTG GTCGAGGATC CGCGCGCGCA GCAGTCGAAC TAG
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Protein sequence | MPRATGPRRG CRLLGLALAA AVALPGCKRG GGSTAEAAQE QPPVALAPEN VAVVSSRRLQ SGPEVAGTLH ARRTATLRAE VGGAVAEVRV EAGERVKAGQ LLARIDASAL QDAVRAARSA VTSAQNALRV AESSARRAHT LAREGAMAEQ DAERAEAQLE AARAQVEDAK ARLAAAEQQA GKTAVRAPFA GVVSERNVSS GDVVSSGAAL YTVIDPSRLQ FEGSVPAASV GALAPGAPVD FAVTGFGGRR FDGHIERVNP AVDPSTGQVR VYVDVPNADG RLLAGLYAQG RVASQASEAL AAPATAVDAT STPPTVMKVQ DGKVQKVAVE IALRDDVAGA VGFRSGVKQG DVLVLGSARG ALADGTPVRV VEDPRAQQSN
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