| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3340 |
|---|
| Symbol | |
|---|
| ID | 3848817 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 3803281 |
|---|
| End bp | 3804768 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637843006 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | YP_443832 |
|---|
| Protein GI | 83719707 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCCTG ATCCGGCTGT GACCAGCCTG CGCCGCACAC TGCTGCGGCG TTTAGCCGCG
CCGCTGTCGA TGCTCGCGCT GATGAGCGGC CTCATTGCCT ACTGGCTTGC GTGGCAATAC
ACGCAGCACG TCGTCGACCG CTCGCTCGCC GATCTTGCGT CGGCGATCTC GAAGCAGATC
CAGATCGCCG GCCCCGACGC GCCGTTTACG GTGCCGCCGC TCGCGCAGGC GATGTTCTCC
GATCCGACCG AACAGCTGAT CTACCGGATC AGCGACGGCG AGCACGAACT CGCCGGCGAT
CCGAAGCTGC CGCTGCAGGG CGCGAGCGTG CGCCGGATGC ACGTCGCGTA CGTGTTCGAG
GCCGAATACG ACAACCAGGC GGTACGCGTC GCGCAAGTGC GCGTCGAGCA GACGACGGAA
AGCGGCAATC CGATGATCGT CGAGGTCGCG CAGCCGGTAC GTTATCGCTA CCGGATCGCG
GCCGAATTCC TGATCGCGAT CATGATGCCG CTGCTGTTGC TGCTGCTCGC CGGCTGGGGA
ATCGTGTGGC GCGTTGTCAA CCAGCAGCTC GGCCCGCTCA CGCATCTTGC CGATTCGCTG
AACCGGCAGA CGCACACGTC GCTCGAGCCC GTCGACGAAT CCGAGGTGCC GCTCGAGATC
CGGCCGCTCA CGAGCGCGAT GAACGCGCTG CTCGGCCGCC TGAAGACCGC GCTCGACGCG
CAGCGCAAAT TCATCGCCGA TGCCGCGCAT CAGCTGCGCA CGCCGCTCAC CGCGATCAAG
CTGCACGCGG AGCAGGCGGC CGTCGCGCGC GATCCGCAAC AGGCGCTGAC CGCGGTGCGC
GAGCTGCGCT CGGCGGCCGA CCGCGCGGTG CGGCTGTCGA ACCAGTTGCT GTCGCTCGCT
CGCGCGGAGC CGGGCGAGCA AGCCGCCCGT TTCGTCGACG TCGACCTCGC CGGCCTCGCG
TTCGAAACCG GCGCCGAATG GGTGCCGCGC GCGCTCGCCG CGCACGTCGA TCTCGGCTTT
CAACGCGGCG ACGGACGCGC CGACGACGAG CCGCTCGTCG TGCGAGGCAA TCTCGTGCTG
CTGCGCGAAG TGATCGCGAA TCTGCTCGAC AACGCGCTGA AGTACGTGCC GCTCGCACGG
CCGCAAGGCG CGCGGATCAC GGTGGACGTC TCGCGGATCG CGCTCGACGA CGGCAAGGCG
GCGGCCGAGA TCGTCGTCGA AGACAACGGC TCGGGCGTGC CCGCCGCGCA GCAGGCGGAC
CTGTTCAAGC GCTTCTTCCG CGGCGACGCG CAAAACGGCA GCGGCGTCGA GACGGGCGCC
GGCCTCGGTC TCGCGATCGT CCACGACATC ATCGCGATGC ATGGCGGCAC GGTGTCGTAC
GCGGACGCGC CCGAGGGCGG CTCGCGCTTC ACCGTGCGCG TGCCGCTCGC GGACAACCCG
TCCGCGCCGG TGCCGCTTTC GTCCGAATCG CCGGCCGCTT CGGCCTGA
|
|---|
| Protein sequence | MSPDPAVTSL RRTLLRRLAA PLSMLALMSG LIAYWLAWQY TQHVVDRSLA DLASAISKQI
QIAGPDAPFT VPPLAQAMFS DPTEQLIYRI SDGEHELAGD PKLPLQGASV RRMHVAYVFE
AEYDNQAVRV AQVRVEQTTE SGNPMIVEVA QPVRYRYRIA AEFLIAIMMP LLLLLLAGWG
IVWRVVNQQL GPLTHLADSL NRQTHTSLEP VDESEVPLEI RPLTSAMNAL LGRLKTALDA
QRKFIADAAH QLRTPLTAIK LHAEQAAVAR DPQQALTAVR ELRSAADRAV RLSNQLLSLA
RAEPGEQAAR FVDVDLAGLA FETGAEWVPR ALAAHVDLGF QRGDGRADDE PLVVRGNLVL
LREVIANLLD NALKYVPLAR PQGARITVDV SRIALDDGKA AAEIVVEDNG SGVPAAQQAD
LFKRFFRGDA QNGSGVETGA GLGLAIVHDI IAMHGGTVSY ADAPEGGSRF TVRVPLADNP
SAPVPLSSES PAASA
|
|---|
| |