| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I3068 |
|---|
| Symbol | rplC |
|---|
| ID | 3848634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 3500846 |
|---|
| End bp | 3501505 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637842734 |
|---|
| Product | 50S ribosomal protein L3 |
|---|
| Protein accession | YP_443572 |
|---|
| Protein GI | 83720557 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0087] Ribosomal protein L3 |
|---|
| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000718216 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTTG GACTCGTAGG TCGCAAGGTT GGCATGACCC GTATCTTCAC GGCGGAAGGG
GACTCGATCC CCGTCACCGT GCTCGACGTG TCGGACAACC GCGTGACGCA GATCAAGACT
GTTGAAACCG ACGGCTACAC GGCCGTGCAG GTTGCATTCG GCTCCCGCCG CGCATCGCGC
GTGACGAAGC CGCTGGCAGG TCATCTCGCC AAAGCCGGTG TCCAAACCGG TGAAATCCTC
AAGGAATTCC GCATCGAAGC CGACAAGGCC GCCGAGTTGT CGAACGGCGC CGTGATCGGT
CCGGATCTGT TCGAAGTGGG CCAGAAGGTC GACGTGCAAG GCGTGTCGAT CGGTAAGGGC
TACGCGGGCA CGATCAAGCG CTACAACTTC GGTTCCGGCC GCGCGTCGCA CGGTAATTCG
CGCTCGCACA ACGTGCCGGG CTCGATCGGT ATGGCGCAGG ATCCGGGCCG CGTGTTTCCG
GGCAAGCGCA TGACGGGTCA CATGGGTGAC GAGACGGTGA CGGTTCAGAA CCTCGAAATC
GCTCGCATCG ACGCCGATCG CAAGCTGCTG CTCGTCAAGG GTGCAGTTCC GGGTGCGAAG
GGCGGCAAGG TTTTCGTGAC GCCGGCCGTG AAGACGCGTG CCGTGAAGGG GGCGAAATAA
|
|---|
| Protein sequence | MSLGLVGRKV GMTRIFTAEG DSIPVTVLDV SDNRVTQIKT VETDGYTAVQ VAFGSRRASR
VTKPLAGHLA KAGVQTGEIL KEFRIEADKA AELSNGAVIG PDLFEVGQKV DVQGVSIGKG
YAGTIKRYNF GSGRASHGNS RSHNVPGSIG MAQDPGRVFP GKRMTGHMGD ETVTVQNLEI
ARIDADRKLL LVKGAVPGAK GGKVFVTPAV KTRAVKGAK
|
|---|
| |