Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2979 |
Symbol | |
ID | 3847484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 3422762 |
End bp | 3423925 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637842645 |
Product | serine protease |
Protein accession | YP_443483 |
Protein GI | 83720352 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family [TIGR02038] periplasmic serine pepetdase DegS |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTGCTCG CACTGATGTT CATCGTGGCG ACGCTCAAGC CGCAGTGGCT CCAACGGCAG GGCCAGCTCG GCAAACAGCT CGCTGCGCCG ATCGTCGCGC TGCGGGAAGT CGCGCCCGGC GTCGGCGGCG CGCCCGCTCA ATCCTCGTAC GCGGATGCCG CGCAAAAGGC AATGCCCGCG GTCGTCAACG TATTCTCCAG CAAGGACGGC TCGCTGCCGC CCGATCCGCG CGCGAAGGAC CCGCTCTTTC GCTATTTCTT CGGCGACCGC AACGCGCGCC GGCAGCAGGA GGAGCCCGCG GCCAATCTGG GGTCGGGCGT CATCGTAAGC TCGGAGGGTT ACATTCTAAC GAACCAGCAC GTCGTCGACG GCGCGGACCA GATCGAAGTC GCGCTCGCCG ACGGCCGCAC GGCCACCGCG AAGGTGATCG GCAGCGATCC GGAAACCGAC CTCGCGGTGC TCAAGATCAA CATGACGAAT CTGCCGACGA TCACGCTCGG CCGCTCGGAC CAGGCGCGGG TCGGCGACGT CGTGCTCGCG ATCGGCAACC CGTTCGGCGT CGGCCAGACG GTCACGATGG GGATCATCAG CGCGCTCGGG CGCAACCACC TCGGCATCAA CACGTTCGAG AACTTCATCC AGACCGACGC GCCGATCAAT CCGGGCAACT CGGGCGGCGC GCTCGTCGAC GTGAACGGCA ACCTGCTCGG CATCAACACG GCGATCTACT CGCGCTCGGG CGGCTCGCTC GGCATCGGCT TCGCGATCCC CGTATCGACC GCGCGCAACG TGCTCGAAAG CATCATCACG ACGGGCGCCG TCACGCGCGG ATGGATCGGC GTCGAGCCGC AGGACGTGAC GCCGGAAATC GCCGAGTCGT TCAGCCTCGC GCAAAAATCG GGCGCGATCG TCGCGGGCGT GTTGCAGGGC GGCCCGGCCG ACAAGGCGGG AATCAAGCCG GGCGACATTC TCGTGTCGAT CGACGACGAG GAAATCACCG ATACGACGAA GCTGCTGAAC GTCGTCGCGC AGATCAAGCC CGGCACGCCG GCGAAGGTTC ATGTCGTGCG CAAGGGCAAG GAGTTCGATG TGACGGTCGT GATCGGCAAG CGGCCGCCGC CACCGAAACA GGCGCTCGAC GATCAGAACA GCGACGAGGA GTAA
|
Protein sequence | MLLALMFIVA TLKPQWLQRQ GQLGKQLAAP IVALREVAPG VGGAPAQSSY ADAAQKAMPA VVNVFSSKDG SLPPDPRAKD PLFRYFFGDR NARRQQEEPA ANLGSGVIVS SEGYILTNQH VVDGADQIEV ALADGRTATA KVIGSDPETD LAVLKINMTN LPTITLGRSD QARVGDVVLA IGNPFGVGQT VTMGIISALG RNHLGINTFE NFIQTDAPIN PGNSGGALVD VNGNLLGINT AIYSRSGGSL GIGFAIPVST ARNVLESIIT TGAVTRGWIG VEPQDVTPEI AESFSLAQKS GAIVAGVLQG GPADKAGIKP GDILVSIDDE EITDTTKLLN VVAQIKPGTP AKVHVVRKGK EFDVTVVIGK RPPPPKQALD DQNSDEE
|
| |