Gene BTH_I2966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2966 
Symbol 
ID3847274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp3413202 
End bp3414080 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content62% 
IMG OID637842634 
Producthypothetical protein 
Protein accessionYP_443473 
Protein GI83718738 
COG category[S] Function unknown 
COG ID[COG3521] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGAGCG GCCGTTTTAA AAGCAGTGCG GCGCGCCGCC TGACGCGCCA CGCAAACTCC 
GGGGATCACC GTGTACCGCT CCCATTGCAA TTATTGCCGC AACGGAATTC GATTTCACTC
AATCGGTGGA AAATTTTTCC GAATAACACG GCATTGCCGG CAGTCATCCG GCATTTGAAG
TCGCAGACGT TTTTGTGCAG CCAAATCGGC AACGCAACTG ATAGTTTTGA CAGGGAGCAA
CGGGCGCCGC GCCCGGAAAA ATCGATGAAT CCGCTTGTGA CTCGTTACGC GTTGCCGCTC
GCCGCCTGCA TTCTGCTCGG CGGCTGCGCG GCCGCCGTGC CGCTCCTCGG TTCGGCGGGC
AGCGCCGCGC TGCAGATGGT GGGCATCGGC AAGCCCGACG TGCCCGATTC GCAAAAGCCG
CCGCGCAATC TCGGCCTCAC GCTCTACGCC GCGCAGAACC TCAACGCCGC GAACGACAAC
CGCCCGCTCG CGCTTGTCGT GCGCCTCTAC GCGCTGAAAG ACCCGACGTC GTTCCAGCAG
GCGCCGTTCG ACAGCTTCAC CGATCCAGCG AAAGAGAAGA CCGCGCTCGG CGCCGATCTG
CTGAGCGTGC GCGAAATCAC GCTGATTCCC GGACAGCGCT ACAACGCGAC AGAGAAGGTA
TCGCGCGAAG CGCAGGCATT CGGCGTCGTC GCGCTCTTTC GCGACCCGGC GCTGCAGCGC
TGGAAACTGA CTTTCGATCC GGCGAAGTCC GAGAAATCCG GCATAATTAT CGGCCTGCAC
AACTGCGCGA TGACCGTGAC GGGCGGCACC GTCATTCCTT CGCAGCAGGG CATGCCGACG
CAGCGGCTCG ATTTGCTTTC GTCGGTGAAC TGCGGGTGA
 
Protein sequence
MKSGRFKSSA ARRLTRHANS GDHRVPLPLQ LLPQRNSISL NRWKIFPNNT ALPAVIRHLK 
SQTFLCSQIG NATDSFDREQ RAPRPEKSMN PLVTRYALPL AACILLGGCA AAVPLLGSAG
SAALQMVGIG KPDVPDSQKP PRNLGLTLYA AQNLNAANDN RPLALVVRLY ALKDPTSFQQ
APFDSFTDPA KEKTALGADL LSVREITLIP GQRYNATEKV SREAQAFGVV ALFRDPALQR
WKLTFDPAKS EKSGIIIGLH NCAMTVTGGT VIPSQQGMPT QRLDLLSSVN CG