Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2960 |
Symbol | |
ID | 3846927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 3407306 |
End bp | 3409144 |
Gene Length | 1839 bp |
Protein Length | 612 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637842628 |
Product | hypothetical protein |
Protein accession | YP_443467 |
Protein GI | 83719151 |
COG category | [S] Function unknown |
COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGT TGTTGCCGTA TTACGAACGC GAACTGTCGT TTCTGCGGCG CTATTCGCTC GAATTCGCGA ACCGGTACCC GAAGATCGCC GCGCGCCTCG CGCAGACGGG CGAGCACTGC GAAGACCCGC ACGTCGAGCG GATGATCGAA TCGTTCGCGC TGCTCGGCGC GCGGATCAAC AAGAAGCTCG ACGACGAGTA TCCCGAATTC ACCGAAGCGC TTGTCGAAGT CCTCTATCCG CATTATTTGC GGCCGTTCCC TTCATGCTCG ATCGCGCAGT TCGGCGCGTC GCATGCGTTC GCCGAACTGA CCGAGCCGCA GGTCGTCGAG CGCGGCACCG AGTTGAAGAG CCGCGCGATT CGAGGCGTGC AGTGCCGGTT CCGCACCGCG TACGACGTGA CGCTCGCGCC GATTCGGCTC GCCGATGCCC GCTACGGATC GATCGCCGCG GCGCCCGCCG CGGCCGCGCT GCCCGGCAAC GCGACAGGCG TGATCTCGAT CACGTTCGAA TCGACGTCGC CGCAGCTCGA CCTTGCGGCG CTGAAGCTCG GCAAGCTGCG CGCGCATCTG CACGGCGAGC AGTCGTTCGT CGCCGCACTG ACTGATTGCC TGTTCGCGCA CGCGCTCGCC TGCTACGTCG AGCCCGATCG CAGCGGCCGC TGGATCGCGC TCGGCAAGAC ACCGTTCGAG CACGCGGGAT TCGACGAGAC CGACGCGCTG ATCGACTATC CTGCCCGTTC GCACCCGGCC TATAGGCTGC TGACCGAATA CTTCGCATTC CCGGACAAAT TCAACTTTGT CGACTTCGAC CTGGGCGTGC TCGCGCGGCG CGCCGGGCAT TGCCGGCAAC TGACGCTGCA CGTCGCGCTG CGCGACGTGC GCAGCGATTC GCACGTCGCG CGGCTGCTCG ATCTGTTGAG CGCGAGCCAC TTTCGGCTGT TCTGCACGCC GGTCGTGAAC CTGTTCCGCC AGCACGGCGA GCCGATCCGG GTCGACCATC GGGCGGTGTC TTATCCGGTG ATCGGCGATG CGCGCCGCGC GTTCGCGTAC GAGGTTTATT CGATCGATTC GGTGCACCTC GTGCGGCAGC GCGCGGATCG CGAAACGGTT GTCGAGTTTC GGTCGTTCTA CTCGCTGCAT CACGGCGAGG CGGCGCAGGC CGGCCACTAC TGGTTCGCGC GCCGCAACGA CGATGTCGCG CGCAAGAGCC CCGGCTATGA GACCGAGATT TCGATCGTCG ATGTCGATTT CGAGCCGGGC GCGCCGCAGA CCGACACGCT GAGCCTCGAC CTCACCTGCA CGAACCGCGA TTTGCCCGCG GCGCTCGCGA CCGGGCTCGA CGGCGGCGAT CTCTTCATCG ACGGCGGCGC GCAGCCCGGC CCGATCGCGC TGCTGCGCCG GCCGACGCCG AGCGCGCGCT TCGAGCGCGG CCACGCCGCG CACTGGCGGC TCGTGTCGCA TCTCGCGCTC AATCACGTTT CGCTTGCCGA AGAGGGGCTC GCCGCGCTGA AGGAGGTGCT CGTGCTGTAC GATCTGAGAC GTTCCGCTGT GTCGACGCGG CACATCGACG GGATCGTCGG CATCGAGCAG AAGAGTGCCG TGCAGTGGCT GCCGGGCAAG CCGTTCGCGA CGTTCGTGCG CGGCGTCGAG ATCCGGCTCG CGATCGACGA CGAGCATTTC GTCGGTTCGA GCCTCGCGAC GTTCGTGCGG ATGATCGACG CATTCTTCGG ACTGTACGTG CACCTCAACA GCTTTGTTCA ACTGATCGTC GTGTCCAAGC GCACCGGCGA GGAGATCATG CGATGCAAAC CGCGCAGCGG CGAATCGATC CTGGCGTAG
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Protein sequence | MEELLPYYER ELSFLRRYSL EFANRYPKIA ARLAQTGEHC EDPHVERMIE SFALLGARIN KKLDDEYPEF TEALVEVLYP HYLRPFPSCS IAQFGASHAF AELTEPQVVE RGTELKSRAI RGVQCRFRTA YDVTLAPIRL ADARYGSIAA APAAAALPGN ATGVISITFE STSPQLDLAA LKLGKLRAHL HGEQSFVAAL TDCLFAHALA CYVEPDRSGR WIALGKTPFE HAGFDETDAL IDYPARSHPA YRLLTEYFAF PDKFNFVDFD LGVLARRAGH CRQLTLHVAL RDVRSDSHVA RLLDLLSASH FRLFCTPVVN LFRQHGEPIR VDHRAVSYPV IGDARRAFAY EVYSIDSVHL VRQRADRETV VEFRSFYSLH HGEAAQAGHY WFARRNDDVA RKSPGYETEI SIVDVDFEPG APQTDTLSLD LTCTNRDLPA ALATGLDGGD LFIDGGAQPG PIALLRRPTP SARFERGHAA HWRLVSHLAL NHVSLAEEGL AALKEVLVLY DLRRSAVSTR HIDGIVGIEQ KSAVQWLPGK PFATFVRGVE IRLAIDDEHF VGSSLATFVR MIDAFFGLYV HLNSFVQLIV VSKRTGEEIM RCKPRSGESI LA
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