| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2956 |
|---|
| Symbol | |
|---|
| ID | 3847290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 3401194 |
|---|
| End bp | 3402129 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637842624 |
|---|
| Product | OmpA domain-containing protein |
|---|
| Protein accession | YP_443463 |
|---|
| Protein GI | 83718754 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGC CGCGCCTGCC CTCCCGCCGC GCTTCCCGTT TCGCGCTCAC GCTCGCCGCG
CTCGCGCTCG GCGGCGCGCT CGGCGGCGCC GCGCGCGCCG ACAACGTCGG CCCCGCCACC
GTCACGCCGA TCGACGCGGG CGGCGTATCC GTGAAATCGA CGCCGCTCGC GGCGCCCGGC
GCCGCGGCGA ACGGCACGGG CACGGGCGCG ATCGTGTCGT CGCCGCCGCC CGCGAACGCG
GCTCCGGGCC AGGTCGTCGC CGGCGGCAAG GTCGCCGACG AGGCGACGAA GGCCGCCGTG
CTGCAGCGCC TGCGCGACAC GTACGGCGCC GCGAACGTCG TCGACCAGAT CGAAGTCGGC
AACGTCGCGA CGCCGCCGAA CTGGTCCGCG AACGTCCAGA AGCTGATCGG CCCGCAACTG
AAGCAGATCA GCAAAGGACA GCTGAAGATC GACGGCACGC AGATCGACGT GAAGGGTGAG
GTGCACAACG AGGCGCAGCG GCAGCAGCTC GCGAGCGACA TGGCCAACGC GCTGAACCCG
ACCTACATGA TCAAGAACGG GCTGCGCGTG AGCGCGTCCG AGCAGGGTCT GCTCGACCAG
ACGCTCGCGA ACCGCACGAT CGAGTTCGAG ACCGGCAGCG CGACGCTCAC GCCGCAAGGC
CGCACGATCC TCGACCAGAT GGCGGGCGCG CTCGCGAAGA TGCCGAACCG GACGGTCGAG
ATCATCGGCC ACACCGACAA TTCGGGCAAT CGCGCGTCGA ACATCGCGCT CAGCCAGTCG
CGCGCGGACG CGGTGAAGGG CTACTTGGTG ACGAAGGGCA TCGCGTCGCA ACAGCTGACG
ACGACGGGCG TCGGCCCCGA CCAGCCGATC GCGTCGAACG ACTCGGCCGA CGGGCGCGCG
CGCAATCGCC GGATCGAGTT CCGCGCGGGG CAGTAA
|
|---|
| Protein sequence | MTKPRLPSRR ASRFALTLAA LALGGALGGA ARADNVGPAT VTPIDAGGVS VKSTPLAAPG
AAANGTGTGA IVSSPPPANA APGQVVAGGK VADEATKAAV LQRLRDTYGA ANVVDQIEVG
NVATPPNWSA NVQKLIGPQL KQISKGQLKI DGTQIDVKGE VHNEAQRQQL ASDMANALNP
TYMIKNGLRV SASEQGLLDQ TLANRTIEFE TGSATLTPQG RTILDQMAGA LAKMPNRTVE
IIGHTDNSGN RASNIALSQS RADAVKGYLV TKGIASQQLT TTGVGPDQPI ASNDSADGRA
RNRRIEFRAG Q
|
|---|
| |