Gene BTH_I2824 details

Gene Information

• Locus tag: BTH_I2824
• ID: 3848181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 3239066
• End bp: 3240952
• Gene Length: 1887 bp
• Protein Length: 628 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637842492
• Product: GGDEF domain-containing protein
• Protein accession: YP_443336
• Protein GI: 83721143
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain
• TIGRFAM ID: [TIGR00254] diguanylate cyclase (GGDEF) domain

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGCGTCGAC TGCGTCGAAC GCTTGCGCGA TCGAACGCCC CACAGAAGCG ATGCGGCCGC 
CCTGCCATCG GCGCGCGACC CGGCACGCGG CTCGGCGCAC GCCGGCCCGA TTTCGCCGCC 
GGGCTGCATC AACGCTTCGC ACCGCGCCGG TCATGCCCGG CGCATGTCCC GATCGCCCCC 
GATCGCCCTG AACGAGCGTG CGCGCCTTCT TCCCGGCAGG CCGCGCGAGA ATGTTTCATC 
ACCAATTTCA CGGCTCGCCT GTGCTGTTCA AAGCTGAACA GCCGGCCGCT TCGGCTACCC 
GTCCGGGTGC ATGGAACCGA TCCGAGCGTA TTGTCAAACG AAAGGCGACG CCTATACTCT 
CGTCAGACGA CACACAAGAC GCATAGCGAA ACCAAGCGGC GCGGGCCCCG ACGCAACAAC 
GTTCGCCCCC CGGCGTTGCG CGCCGATTTC CCATCTCGAT CCAGAAACAG CGTTGCGGAG 
GCTACCGTGA GCACTGTCTT CACAGCCCAT GAATCGCCGC GTGTAATCAA CATCATCGCC 
CGGCTCTACA CCGCATGCCT GCTGATCGGC TTCGCGCTCG TGCCGGCGTA CCTGATCGTC 
TACGTGCGGT TCTTCATCGA TCCGCGGCTC GTCTTCGAGA ACCATCAGTT CCACGAGCTG 
GCGATCGCCG CCGCGACGCT CGAGGGCCTC TTCGTCACCT ACGTGACGTG GCGCTGCTAT 
CTGTCGTCGG GCGAGCCGCT GCTGCGCTGG CTCACGCTCG GCTTCTTCGG CTTCGCGCTG 
ATCTACTCGC TGCACGGCGC GTTCACCGGC ATGGCGCACC AGAACATCTG GCTGTTCCTG 
CTGTACGGCC CCGCATCGCG CCTCGTGATG TCGATCCTGC TGCTCGTCGG GCAACTGTCG 
TACTTCAGGA ACGCCGATCC GCCCGAGCGT CGCACGCTGC TGTCGACATG GCTGCCGTGG 
ATCGCCGGCT TCGTGCTCGT CTGCGTCGCG GTCGCCGCCA TTGCGTACTC GCCGATCGCC 
GGCCATCTGT GGACGCGCGC GTCGATGGAG GGCGGCGCGA TGATCGTGTC GCTCGTCAAC 
GTCGCGCTGC TGCTCGCGCG TCGCATCCGC ACGCCGTTGA TGCTCGTCTA CGGCATCTCG 
GTGATGTCGT TCGCGCTGTC GTCGATCGCA TTCATTCTCG GCAAGCCGTG GAACCACATG 
TGGTGGCTCG CGCATGCGAT CTTCGCGGCC GGATTCTTCA TGCTGAGCTT CGGCGTCGTT 
CAGGCATTGA TCACGACCCG CTCGTTCGCG ACCGTCTACA GCCAGCAGGA TCTGATGGCG 
CGGCTCGCCG AATCGATGGC GCGCACCGAG GGCGCGCTGC AGGAGCTCAA GCGCACCAAC 
CAGAAGCTCG AGCATCTCGC GACCACCGAT CCGCTGACGG GCGCGTCGAA CCGGCGCAAG 
TTCATCGAGC AGATGCAGGC GGAAATCGCG CGCGCGAAGC GCGACGGCAC TGCGTTCTCG 
CTGCTCGCGC TCGATCTCGA CAACTTCAAG ACGATCAACG ACAACTATGG CCATCAGGTC 
GGCGACGTCG TGCTGCGCAA CTTCGTGCGT CAGTGCCTTG CCGCGATCCG TCCTTACGAC 
CACATCGCGC GCGTCGGCGG CGAGGAGTTC ATGGTGCTGC TGCCGCGCAT GCTCGCCGAC 
ACGGCGAGCG GAATCGCGGA GCGCGTGCGG ACCACGATCG CGAACGCGTC GTTCGGCATC 
GACGGCACGC ATACGCCCGT GACCGTGAGC ATCGGCGTGT CGCAGTACGG GCGCGACGGC 
GACACCGTCG ACGAAATCCT GAGCGCCGCC GACAAGCTGC TCTATCGCGC GAAAAACGAG 
GGGCGCAATC GCGTCGTCGC GTCGTAG 

 

Protein sequence

MRRLRRTLAR SNAPQKRCGR PAIGARPGTR LGARRPDFAA GLHQRFAPRR SCPAHVPIAP 
DRPERACAPS SRQAARECFI TNFTARLCCS KLNSRPLRLP VRVHGTDPSV LSNERRRLYS 
RQTTHKTHSE TKRRGPRRNN VRPPALRADF PSRSRNSVAE ATVSTVFTAH ESPRVINIIA 
RLYTACLLIG FALVPAYLIV YVRFFIDPRL VFENHQFHEL AIAAATLEGL FVTYVTWRCY 
LSSGEPLLRW LTLGFFGFAL IYSLHGAFTG MAHQNIWLFL LYGPASRLVM SILLLVGQLS 
YFRNADPPER RTLLSTWLPW IAGFVLVCVA VAAIAYSPIA GHLWTRASME GGAMIVSLVN 
VALLLARRIR TPLMLVYGIS VMSFALSSIA FILGKPWNHM WWLAHAIFAA GFFMLSFGVV 
QALITTRSFA TVYSQQDLMA RLAESMARTE GALQELKRTN QKLEHLATTD PLTGASNRRK 
FIEQMQAEIA RAKRDGTAFS LLALDLDNFK TINDNYGHQV GDVVLRNFVR QCLAAIRPYD 
HIARVGGEEF MVLLPRMLAD TASGIAERVR TTIANASFGI DGTHTPVTVS IGVSQYGRDG 
DTVDEILSAA DKLLYRAKNE GRNRVVAS