Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I2625 |
Symbol | |
ID | 3848730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 2987542 |
End bp | 2989347 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637842294 |
Product | RND efflux system, outer membrane lipoprotein, NodT family protein |
Protein accession | YP_443140 |
Protein GI | 83720224 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.407091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAGTAA GAATGCGTTG CACCATTGTC GGTTTATTCG GCAATCCGCA AAAAAATATA ATCGTACCCG ACTCATCTTT ATCCGAAAGG GAGAAAATCG TGCAGTCTCC GGCAACAAGA GGGACGTTTG CACTCGCGGT TCTTGCAATC TCATTAATAA TGGCCGGATG TGCAAGCATG GGCGATGTTG CACCGCAAGC AAAGCAGATC GATCCGGCGT CGCTCGATGC GGGCGCGGCG ATCGCGGCGG CCGAGCGCGA CGCGGGCTGG CCCGCGGCCG ACTGGTGGCG CGCGTATCGC GATCCGCAGC TCGACGCGTG GATCGCCGCG TCGCTCGCCG GCAACCCGTC GCTTGCCGCC GCGCAGGCCC GCGTGCGCGA GGCGCAGTCG CTCGCGCGCG TCGCGCATGC CGAGGAACTG CCGCAGTTGA ACGGCAACCT GTCACTGATG CGCCAGCACT GGCCGGACAA CGTCTACTAC GGCCCAGGCC CGCTCGCGAA CGCCGACACC TGGAACAACA CGGGCACGTT GAGCCTGTCG TACCACCTCG ACCTCTGGGG CAAGGACAAG AACAACGCGC AGCGCGCGCT CGACGCGGCG CGCGCCCGCG CGGCCGACGC GCGCGCCGCG CAGCTCGAGC TCGAAGCGAA CGTGGTGCGC GCGTACATCG ATTTCGCAAA GAACTACGCG CTCCTCGACA TCGCGCACGC GACCTACGAC CGCCAGAACG AGCTCGCCGA ACTGGCGCGC AAGCGCCTGC GCGCGGGCAT CGGCACGCAG CTCGAAGTGA GCCAGGCCGA GGCGCCGCTG CCCGATTATT CGCGGCAGAT CGATTCGTAC GAAGAGGCGA TCCAGTTGGG CCGCCATCAG CTCGCCGCGC TCGCGGGCAA GGGGCCCGGC GCGGGCGCGT CGCTCGGGCG GCCGAAGCTC GCGCTCGACG CGAACGCCGG CCTGCCGTCC GCGCTGCCCG CGGAGTTGAT CGGCCGCCGG CCGGACGTCG TCGCCGCGCG CTGGACGGTC GACGCGCAGG CGCGCGGCAT CGACGTCGCG AAGGCCGCGT TCTATCCGAA CGTCGACCTG ATCGCGTCGC TCGGCGGCTT CGCGGTCAGC GCGCCGTTCG CGACGTTCCT GCGCGCGATG AACGGCGGCT GGTCGGCGGG CCCCGCGCTC ACGCTGCCGA TCTTCGAGGG CGGCCGGCTG CGCGCGCAAC TGGGCGTCGC CGCGGCGGGC TACGACCAAG CGGTCGAGCA CTACAACCAG ACGATCGTCG GCGCGCTGAA GGACATCGCC GACAACGTCG TGCGCCTGCG CTCGCTCGAC TCGCAACAGA AGGACGCGGC GCGCGCGGTC TCGCTCACGC GGCGATCGTA CGATCTTTCG CACACGGGCT TCAGCCGCGG GCTCACCGAC TACGTGAACG TGCTCATCGC GCAGAGCCAG TTGCTGACCG CGCAGGAGAA CCAGACGCGC GTCGAGGCCG CGCGTCTTGC CGCGCACGCG TCGCTGATGG CCGCGCTCGG CGGCGGGCTC GAAACCGCGG GCGACGCACC GCATGACACG CCGGCGGGCG ATGCGCGGCG CGCGGACGCT TCGGACGCTT CGGCGGCCTC GTCCGCTTCG GCCGCCGCAT CCGTGTCGGG CGCGCCGGCA GGAAGCCGTG CCGCCGGCAT CGGCGCTGCG GTCTCGGCCG GCGCCGACCG CGCAACCGAC AATACGCGCG CATCGGCCAC CACGCCCGCT GCAGCCCCCG CGCACGCCGC TCGCGCGCGG GCGCCGGCGA GCGCCGCCGC GCCCGCCATC CGCTAA
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Protein sequence | MTVRMRCTIV GLFGNPQKNI IVPDSSLSER EKIVQSPATR GTFALAVLAI SLIMAGCASM GDVAPQAKQI DPASLDAGAA IAAAERDAGW PAADWWRAYR DPQLDAWIAA SLAGNPSLAA AQARVREAQS LARVAHAEEL PQLNGNLSLM RQHWPDNVYY GPGPLANADT WNNTGTLSLS YHLDLWGKDK NNAQRALDAA RARAADARAA QLELEANVVR AYIDFAKNYA LLDIAHATYD RQNELAELAR KRLRAGIGTQ LEVSQAEAPL PDYSRQIDSY EEAIQLGRHQ LAALAGKGPG AGASLGRPKL ALDANAGLPS ALPAELIGRR PDVVAARWTV DAQARGIDVA KAAFYPNVDL IASLGGFAVS APFATFLRAM NGGWSAGPAL TLPIFEGGRL RAQLGVAAAG YDQAVEHYNQ TIVGALKDIA DNVVRLRSLD SQQKDAARAV SLTRRSYDLS HTGFSRGLTD YVNVLIAQSQ LLTAQENQTR VEAARLAAHA SLMAALGGGL ETAGDAPHDT PAGDARRADA SDASAASSAS AAASVSGAPA GSRAAGIGAA VSAGADRATD NTRASATTPA AAPAHAARAR APASAAAPAI R
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