| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2567 |
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| Symbol | |
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| ID | 3849832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 2931964 |
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| End bp | 2933472 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637842236 |
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| Product | RNA pseudouridylate synthase family protein |
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| Protein accession | YP_443084 |
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| Protein GI | 83720156 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00446007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATCGCGC GCCGCCGCGC GGCCGCGAAA TCGAAGAATC CCGAGGCGGC GGAGAGCGCC
GACGCACCTC CGGCGGCGGA AGCCGGGGCG GACGCCGGCG TCGCGAAAGC GCCGGCTCGC
GCGCCGCGCA GCAAGGAGGG CGCGGCGAAG GCGCCGCGCA AGACAGCAGG CAAGCGGGAA
GGCGCGGCGC GGCAAGGCGG CCAGGCGAAG CGCGGCGCGC CGGCGGCGGC CGCGCCGTCC
GTCGAGGCTG GCCAGGACGA TGTGTTTGCC TATGTGATTT CGCCCGCATT CGATGCCGAC
AACAACGCGT CGGGCGGCGG CGTGCGCGCG CCGATGCTGC GCCGGGGCCG CCAGAATCAG
CCGAAGCGCG TGCTGTCGCC GGACGACGAC GCGCCGAAGT TGCACAAGGT GCTCGCGGAA
GCCGGCATGG GCTCGCGCCG CGAGATGGAG GAGCTCATCA TCGCCGGCCG CGTGTCGGTG
AACGGCGAGC CGGCGCATAT CGGCCAGCGG ATCATGCCGA CCGACCAGGT CCGGATCAAC
GGCAAGCCGG TCAAGCGCAA GCTGCCGAAC AAGCCGCCGC GCGTGCTGCT TTACCACAAG
CCGACGGGCG AGATCGTGAG CCACGCGGAC CCTGAGGGCC GCCCGTCGGT GTTTGACCGG
CTGCCGCCGA TGAAGACCGC GAAATGGCTC GCGGTCGGCC GCCTCGACTT CAATACCGAG
GGCCTGCTGA TGCTGACGAC GTCCGGCGAC CTCGCGAACC GCTTCATGCA TCCGCGTTAC
AGCGTCGAGC GCGAGTATGC GGTGCGCGTT GTCGGCGAGC TGTCCGAGGC GTCGCGCCAG
AAGCTGCTGC ACGGCGTCGA GCTCGACGAC GGCCCGGCTA ACTTCCTGCG CATTCGCGAC
GGAGGCGGCG AAGGCACGAA CCACTGGTAT CACGTCGCGC TCGCCGAAGG GCGCAACCGC
GAGGTGCGGC GGATGTTCGA GGCGGTCGGC CTGATGGTGA GCCGCCTGAT TCGCACGCGT
CACGGCCCGA TTCCGCTGCC GCGCGGGTTG AAGCGCGGCC GCTGGGAGGA GCTCGACGAG
GCGCAGGTGC GGCGCCTGAT GTCGACGGTC GGCCTGAAGG CGCCGGTCGA GGAGAAGGGC
AAGCGCGGCG GCGCGGCCGA GCGCCGCCAG CCCGATCCGA TGCAGACGTC GATGGGCTTC
ATCAATCGCG AACCGGTGCT GACGACTCAC GGCCAGCTCG ACCAGCCGCG GCGCGGCCGG
CGCGGCCCGG CGGGCGGCGG CTTCGGCGCG GGCCTCGGCG GCGGCTATGC CGGCCTGCCG
GGCTACGGCG GCGCGCCGCG CCAGGGCGGC CGCGACGTCG ACGGCAACCG TGCGCCCCAC
GGAGGCGCGG GCGCGAACAA GCGCGGCGCG GGCAAGGGCG CGCGCAACCC GAACGGCAAT
CGCGCCGAAG GCGGCGCGCG CGGCGGCCAG CGTTCGCCGC AGCAGCGCAA TCGTTCGCGC
AGCCGCTGA
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| Protein sequence | MIARRRAAAK SKNPEAAESA DAPPAAEAGA DAGVAKAPAR APRSKEGAAK APRKTAGKRE
GAARQGGQAK RGAPAAAAPS VEAGQDDVFA YVISPAFDAD NNASGGGVRA PMLRRGRQNQ
PKRVLSPDDD APKLHKVLAE AGMGSRREME ELIIAGRVSV NGEPAHIGQR IMPTDQVRIN
GKPVKRKLPN KPPRVLLYHK PTGEIVSHAD PEGRPSVFDR LPPMKTAKWL AVGRLDFNTE
GLLMLTTSGD LANRFMHPRY SVEREYAVRV VGELSEASRQ KLLHGVELDD GPANFLRIRD
GGGEGTNHWY HVALAEGRNR EVRRMFEAVG LMVSRLIRTR HGPIPLPRGL KRGRWEELDE
AQVRRLMSTV GLKAPVEEKG KRGGAAERRQ PDPMQTSMGF INREPVLTTH GQLDQPRRGR
RGPAGGGFGA GLGGGYAGLP GYGGAPRQGG RDVDGNRAPH GGAGANKRGA GKGARNPNGN
RAEGGARGGQ RSPQQRNRSR SR
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