| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2565 |
|---|
| Symbol | nusA |
|---|
| ID | 3849746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 2929726 |
|---|
| End bp | 2931201 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637842234 |
|---|
| Product | transcription elongation factor NusA |
|---|
| Protein accession | YP_443082 |
|---|
| Protein GI | 83719213 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0195] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00130089 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCGCG AAGTGTTGAT GTTGGTGGAT GCGCTGGCGC GCGAGAAGAA CGTCGACAAG
GACGTCGTGC TGGGCGCGCT CGAAGCGGCC CTCGCGTCGG CTTCCAAGAA GCTGTTCGAC
GAAGGCGCCG AGATCCGCGT ACATATCGAT CGCGAGAGCG GTGAACACGA GACGTTCCGT
CGTTGGCTCG TCGTGCCCGA CGAGGCGGGC CTCCAGGAGC CGGATCGCGA GATCCTGCTG
TTCGAGGCGC GCGAGCAGAA GCCCGGCGTC GAGGTCGGCG ACTACATCGA GGAGCCGGTG
CCGTCGATCG AGTTCGGCCG GATCGGCGCG CAGGCCGCGA AGCAGGTGAT CCTGCAGAAG
GTGCGCGACG CGGAGCGCGA GCAGATCCTG AACGACTACC TCGAGCGCGG CGAGAAAATC
ATGACGGGCA CGGTGAAGCG CCTCGACAAG GGCAACTTCA TCGTCGAATC GGGCCGCGTC
GAGGCGCTGT TGCGCCGCGA CCAGCTGATT CCGAAGGAAA ACCTGCGCGT GGGCGACCGC
GTGCGCGCGT ACATCGCGAA GGTCGACCGC ACCGCTCGCG GCCCGCAGAT CGAGCTGTCG
CGCACCGCGC CCGAATTCCT GATGAAGCTC TTCGAGATGG AAGTGCCGGA AATCGAGCAG
GGGCTTCTCG AGATCAAGGC GGCGGCTCGC GATCCGGGCG TGCGCGCTAA GATCGGCGTC
GTCGCGTACG ACAAGCGGAT CGATCCGATC GGCACGTGCG TCGGCATCCG CGGCTCGCGC
GTGCAGGCCG TGCGCAACGA GCTCGGTGGC GAAAACATCG ACATCGTGCT ATGGTCGGAG
GATCCTGCCC AGTTCGTGAT CGGCGCGCTC GCGCCGGCGG CCGTCCAGTC GATCGTCGTC
GATGAAGAAA AGCATTCGAT GGACGTCGTC GTCGACGAGA ACGAATTGGC TGTCGCGATC
GGCCGCAGCG GCCAGAACGT GCGTCTTGCC AGCGAACTGA CCGGCTGGCA GATCAACATC
ATGACGCCGG ACGAATCCGC CCAGAAGCAG AACGAAGAGC GCGACGCGCT GCGCGGCCTG
TTCATGGCGC GCCTCGACGT CGACGAGGAA GTTGCGGACA TCCTGATCGA CGAGGGCTTC
ACGAGCCTCG AAGAGATCGC TTACGTGCCG CTCAACGAAA TGCTCGAGAT CGAGGCATTC
GACGAGGATA CCGTCCACGA GCTGCGCAAC CGCTCGCGCG ACGCGCTGCT CACGATGGCG
ATCGCGAACG AGGAGAAGGT CGAGACGGCC GCCCTCGATC TGAAGAGTCT CGACGGCGTC
ACGCCCGAAC TGCTCGCGAA GCTGGCCGAG CAGAGCGTGC AGACGCGCGA CGATCTCGCG
GAGCTTGCCG TGGACGAGCT GGTCGATATG ACCGGCATGG AAGAGGAAGC CGCGAAGGCG
CTGATCATGA AGGCGCGCGA ACACTGGTTC CAGTGA
|
|---|
| Protein sequence | MSREVLMLVD ALAREKNVDK DVVLGALEAA LASASKKLFD EGAEIRVHID RESGEHETFR
RWLVVPDEAG LQEPDREILL FEAREQKPGV EVGDYIEEPV PSIEFGRIGA QAAKQVILQK
VRDAEREQIL NDYLERGEKI MTGTVKRLDK GNFIVESGRV EALLRRDQLI PKENLRVGDR
VRAYIAKVDR TARGPQIELS RTAPEFLMKL FEMEVPEIEQ GLLEIKAAAR DPGVRAKIGV
VAYDKRIDPI GTCVGIRGSR VQAVRNELGG ENIDIVLWSE DPAQFVIGAL APAAVQSIVV
DEEKHSMDVV VDENELAVAI GRSGQNVRLA SELTGWQINI MTPDESAQKQ NEERDALRGL
FMARLDVDEE VADILIDEGF TSLEEIAYVP LNEMLEIEAF DEDTVHELRN RSRDALLTMA
IANEEKVETA ALDLKSLDGV TPELLAKLAE QSVQTRDDLA ELAVDELVDM TGMEEEAAKA
LIMKAREHWF Q
|
|---|
| |