Gene BTH_I2554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2554 
SymbollpdA-1 
ID3849484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp2911840 
End bp2913270 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content65% 
IMG OID637842223 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_443071 
Protein GI83720959 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.40022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAAGG AATTTGACGT CGTCGTGATC GGTGCGGGCC CGGGCGGCTA TATCGCCGCG 
ATCCGCGCCG CTCAACTGGG CAAAACGGTT GCCTGCATCG AAAAATGGAA GAACGCGGCC
GGCGCGCTGA AGCTGGGCGG CACGTGCCTG AACGTCGGCT GCATCCCGTC GAAGGCGCTG
CTCGCGTCGT CGGAGGAGTT CGAGAACGCG CAGCACCATC TCGCCGACCA CGGCATCAGC
GTCGACGGCG TGAAGATGGA CGTCGCGAAG ATGCTCGCGC GCAAGGACGG GATCGTCGAG
AAGATGACGG GCGGGATCGA GTTCCTGTTC AAGAAGAACA AGATCACGTG GCTCAAGGGC
CACGGCAAGT TCGCCGGCAA GACCGACGCC GGCGTGCAGA TCGAGGTGAG CGGCGAGGGC
GAGACGGAAG TCGTCACCGC GAAGAACGTG ATCATCGCGA CGGGCTCGAA GGCGCGTCAC
CTGCCGAACG TGCCGGTCGA CAACAAGATC GTCGCGGACA ACGAAGGCGC GCTGACGTTC
GACTCGGTGC CGAAGAAGCT CGCCGTGATC GGCGCGGGCG TGATCGGCCT CGAGCTCGGC
TCGGTGTGGC GCCGTCTCGG CGCCGAAGTG ACGGTGCTCG AAGCGCTGCC GGCGTTCCTC
GGCGCGGCCG ACGAGGCGCT CGCGAAGGAA GCGGCGAAGC TGTTCAAGAA GCAGGGCCTC
GACATCCACC TCGGCGTGAA GATCGGCGAA GTGAAGACGA GCGCGAACGG CGTGTCGATC
GCTTACACCG ACAAGGACGG CAACGCGAAG ACGCTCGACG CCGACCGCCT GATCGTGTCG
GTCGGCCGCG TGCCGAACAC CGACAACCTC GGCCTCGAGG CGATCGGCCT GAAGGTGAAC
GAGCGCGGCT TCATCGACGT CGACGACCAC TGCCGCACCG CGGTGCCGAA CGTGTACGCG
ATCGGCGATG TGGTGCGCGG CCCGATGCTC GCGCACAAGG CGGAAGACGA GGGCGTGCTG
GTTGCGGAAG TGATCGACGG CCAGAAGCCG CATATCGACT ACAACTGCAT TCCGTGGGTG
ATCTACACGT ACCCGGAAAT CGCGTGGGTC GGCAAGACGG AGCAGCAGTT GAAGGCCGAG
GGCCGCGAGA TCAAGTCGGG CAAGTTCCCG TTCTCGATCA ACGGCCGCGC GCTCGGCATG
AACGCGCCGG ACGGCTTCGT GAAGATGATC GCGGATGCGA AGACCGACGA GCTGCTCGGC
GTGCACGTGA TCGGCGCGAA CGCGTCGGAC CTGATCGCCG AAGCCGTCGT CGCGATGGAG
TTCAAGGCGG CGTCGGAAGA CATCGCCCGC ATCTGCCATC CGCACCCGTC GATGTCCGAA
GTGATGCGCG AAGCGGCGCT CGCCGTCGAC AAGCGCTCGC TCAACAGCTA A
 
Protein sequence
MSKEFDVVVI GAGPGGYIAA IRAAQLGKTV ACIEKWKNAA GALKLGGTCL NVGCIPSKAL 
LASSEEFENA QHHLADHGIS VDGVKMDVAK MLARKDGIVE KMTGGIEFLF KKNKITWLKG
HGKFAGKTDA GVQIEVSGEG ETEVVTAKNV IIATGSKARH LPNVPVDNKI VADNEGALTF
DSVPKKLAVI GAGVIGLELG SVWRRLGAEV TVLEALPAFL GAADEALAKE AAKLFKKQGL
DIHLGVKIGE VKTSANGVSI AYTDKDGNAK TLDADRLIVS VGRVPNTDNL GLEAIGLKVN
ERGFIDVDDH CRTAVPNVYA IGDVVRGPML AHKAEDEGVL VAEVIDGQKP HIDYNCIPWV
IYTYPEIAWV GKTEQQLKAE GREIKSGKFP FSINGRALGM NAPDGFVKMI ADAKTDELLG
VHVIGANASD LIAEAVVAME FKAASEDIAR ICHPHPSMSE VMREAALAVD KRSLNS