| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2542 |
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| Symbol | |
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| ID | 3846954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 2900156 |
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| End bp | 2901481 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637842211 |
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| Product | type II/III secretion system protein |
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| Protein accession | YP_443059 |
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| Protein GI | 83718419 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATA AACTGATTGC ATGGGCGGTG GCGTTTGGCG TGTTGCTGTC GTTCGCCGCG
CGCGCGGCCG AGATGGGGAC GATCGAGCTC GCGACGGGCG CGCAGCGGCA GATCGCCGTC
GGGCGCGGCG TGCAGCGGGT CGCGATAGGC GATCCGAGCG TCGCCGACGT GGTCGTCATC
AAGGGCGGGC GCGGCGGCGT GCTGCTCGTC GCGAAGGCGG CCGGCTCGAC GAACCTGATG
GTGTGGGAGC GCGGCCGCGA CGAGCCCTCG GTCTATACGG TCAACGTCGC GAGCGGCGCG
GCGCGCGCGC TGCTCGACGG CGGCTCGCCG AGCGTGAAGG CGTACAACGG CACGGCGGTC
GTGTCCGGCT CGGCCGCGAC GCTCGACGCG CATGCGCGCG CGCTCGCCGT CGGCAAGGGG
ATGGCGGGCA AGGACGGCGG CGTCGTCGAC GCGTCGACAG TCGGCGGCAA GAACGTCGTG
CAGGTGGACG TGCGCGTCGT CGAGTTCAGC CGCTCGGTGC TCAAGCAGGC GGGCCTGAAT
TTCTTCAAGC AGAGCAACGG CTTCACGTTC GGCTCGTTCG CGCCCGCCGG CCTCGCGTCG
GTGACGGGCG GCGGCACGTC GTCGATGTCG GTGTCGGCGA ACATTCCGAT CGCGTCCGCG
TTCAATCTCG TCGTCGGTTC CGCGACGCGC GGCCTGTTCG CCGATCTGTC GATCCTCGAG
GCGAACAACC TCGCGCGCGT GCTCGCGCAG CCGACGCTCG TCGCGCTGTC CGGGCAGAGC
GCGAGCTTCC TCGCGGGCGG CGAGATTCCG GTGCCGGTGC CGCAGTCGCT CGGCACGATC
TCGATCGACT GGAAGCCGTA CGGCGTGGGC CTCACGCTGA CGCCGACCGT GCTGAGCCCG
CGCCGGATCG CGCTGAAGGT CGCGCCGGAA TCGAGCCAGC TCGACTTCGT CCATTCGATC
ACGATCAACG GCGTGACGGT GCCCGCGCTC ACGACGCGCC GCGCGGACAC GACGGTCGAG
CTGGGCGATG GGGAGAGCTT CGTGATCGGC GGGCTGATCG ACCGCGAGAC GACCTCGAAC
GTCGACAAGG TGCCGTTCCT CGGCGATCTG CCGATCATCG GCACGTTTTT CAAGCACCTC
AGTTATCAGC AGAACGACAA GGAACTCGTG ATCATCGTGA CGCCGCATCT CGTCGCGCCG
ATCGCGAAGA ACGCGTCGCT GCCCGCGACG CCCGGCGAGT TGTCCGAGCA GCGCGACGGG
CCGGTGTGGC GGTCGTATCT CGGCGGCGTG CTGTCGCCGG ACGCGGGGCC GGGGTTCTCG
AAATGA
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| Protein sequence | MKNKLIAWAV AFGVLLSFAA RAAEMGTIEL ATGAQRQIAV GRGVQRVAIG DPSVADVVVI
KGGRGGVLLV AKAAGSTNLM VWERGRDEPS VYTVNVASGA ARALLDGGSP SVKAYNGTAV
VSGSAATLDA HARALAVGKG MAGKDGGVVD ASTVGGKNVV QVDVRVVEFS RSVLKQAGLN
FFKQSNGFTF GSFAPAGLAS VTGGGTSSMS VSANIPIASA FNLVVGSATR GLFADLSILE
ANNLARVLAQ PTLVALSGQS ASFLAGGEIP VPVPQSLGTI SIDWKPYGVG LTLTPTVLSP
RRIALKVAPE SSQLDFVHSI TINGVTVPAL TTRRADTTVE LGDGESFVIG GLIDRETTSN
VDKVPFLGDL PIIGTFFKHL SYQQNDKELV IIVTPHLVAP IAKNASLPAT PGELSEQRDG
PVWRSYLGGV LSPDAGPGFS K
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