| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2516 |
|---|
| Symbol | rpiA |
|---|
| ID | 3847203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 2869101 |
|---|
| End bp | 2869808 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637842185 |
|---|
| Product | ribose-5-phosphate isomerase A |
|---|
| Protein accession | YP_443035 |
|---|
| Protein GI | 83718667 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0120] Ribose 5-phosphate isomerase |
|---|
| TIGRFAM ID | [TIGR00021] ribose 5-phosphate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0426683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGACGCTTC TCATGACCCA AGACGAACTC AAACGCCTCG TCGGCGAGGC CGCCGCCCGA
TACGTGACCG ACAACGTGCC GCAAGGCGCG GTGATCGGCG TCGGCACGGG CTCGACCGCC
AACTGCTTCA TCGACGCGCT CGCGGCCGTC AAGGATCGCT ATCGCGGCGC GGTGTCGAGT
TCGGTGGCGA CGACCGAGCG CCTGAAGTCG CACGGCATCC GGGTGTTCGA TCTGAACGAG
ATCGAATCGC TGCAGGTGTA TGTCGACGGC GCCGACGAGA TCGACGAAAG CGGCGCGATG
ATCAAGGGCG GCGGCGGCGC GCTTACGCGC GAGAAGATCG TCGCTTCGGT CGCGGAAACG
TTCGTCTGCA TCGCCGATGC GAGCAAGCGC GTCGCGATGC TCGGCCAGTT TCCGCTGCCC
GTCGAGGTCG TGCCGATGGC GCGCACCGCG ATCGGCCGCC GGCTTGCCGC GCTGGGCGGC
GTGCCCGTGC TGCGCGTGAA GCAGGACGGC ACGCCGTACG TGACCGACAA CGGCAACGAG
ATTCTCGACG TGAAGGGCTT GCGGATCGAC GATCCGCGCG CGCTCGAAGC GGCGATCAAC
GGCTGGCCCG GCGTCGTGAC GGTCGGCCTG TTCGCGCAAC GCGGCGCGGA TCTCTGCCTG
CTCGGCACCG AGCACGGCGT CGAGACGCTC CGTTACGCGG CACGTTAA
|
|---|
| Protein sequence | MTLLMTQDEL KRLVGEAAAR YVTDNVPQGA VIGVGTGSTA NCFIDALAAV KDRYRGAVSS
SVATTERLKS HGIRVFDLNE IESLQVYVDG ADEIDESGAM IKGGGGALTR EKIVASVAET
FVCIADASKR VAMLGQFPLP VEVVPMARTA IGRRLAALGG VPVLRVKQDG TPYVTDNGNE
ILDVKGLRID DPRALEAAIN GWPGVVTVGL FAQRGADLCL LGTEHGVETL RYAAR
|
|---|
| |