| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I2433 |
|---|
| Symbol | |
|---|
| ID | 3847992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 2783193 |
|---|
| End bp | 2784242 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637842102 |
|---|
| Product | ribose ABC transporter, permease protein |
|---|
| Protein accession | YP_442954 |
|---|
| Protein GI | 83720324 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.19854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGC ATGACCGGAC GGCGACGCCG TCGTCGTCTT CTTCCGCGCC CGCCGCCGCG
GGGGCGGCGC AGATCGGGGC GCCCGGCGCG CCGCTGCCCG CCGGCTCGCG GGCGCGGCGC
GCGCTTGCCG CGCTCAGGCG CTCGACGACG TTCTACCCGC TCGTCGGGCT CGTCGCCGTG
TGCGTCGCGA TGATGTTCGC GAGCGACGGC TTCCTGAGCG CGGCGAACCT CGAGAACGTG
CTGCGGCAGG TGTCGATCAA CGCGATCATC GGCGTCGGCA TGACCTGCGT GATCCTGACG
GGCGGCATCG ATCTGTCGGT CGGCTCGGCG ATGGCGCTGT CCGGCACGCT GACGGCGGGC
CTGCTCGTCG CGGGTGTGAA CGGCGCGGCG GCGCTTGCCG CGGGCATCGG CGTCGGGGTC
GCGCTCGGCG CGGCGAACGG CTTTTTCGTC GCGTTCGCCG GGATGCCGCC CATCATCGTC
ACGCTCGCGA CGATGGGCAT CGCGCGCGGC CTCGCGCTCA TCTACACGGG CGGCTATCCG
ATCGACGGGC TGCCCGACTG GGTCCGCTTC TTCGGCAGCG GCAAGGCGCT CGGCGTGCCG
GCGCCCGTGC TGACGATGCT CGTCGTCTAC GCGCTCGCGT GGCTCATGCT CGAGCGCATG
CCGTTCGGCC GCTACGTCTA CGCGATCGGC GGCAACGAGC ACGCGACGCG GCTCTCGGGC
GTGCGCGTCG CGCGCGTGAA GCTTGCCGTC TACACGTTCG CGGGGCTCAC GTCCGCGCTC
GCCGCGATCG TGCTGACGGG ACGCCTGATG AGCGGACAGC CGAACGCGGG CGTCGGCTTC
GAGCTCGACG CGATCGCGGC CGTCGTGATG GGCGGCACGT CGATCGCGGG CGGGCGCGGC
TCGATCGTCG GCACGCTCGT GGGCGCGCTG CTGCTCGGCG TGCTGAACAA CGGCCTGAAC
ATGATCGGCG TGAATCCCTA CGTGCAGAAC GTGATCAAGG GCGCAATCAT CCTGCTCGCG
ATCTACATCG GCCGCGAGCG CCGCAAGTGA
|
|---|
| Protein sequence | MNMHDRTATP SSSSSAPAAA GAAQIGAPGA PLPAGSRARR ALAALRRSTT FYPLVGLVAV
CVAMMFASDG FLSAANLENV LRQVSINAII GVGMTCVILT GGIDLSVGSA MALSGTLTAG
LLVAGVNGAA ALAAGIGVGV ALGAANGFFV AFAGMPPIIV TLATMGIARG LALIYTGGYP
IDGLPDWVRF FGSGKALGVP APVLTMLVVY ALAWLMLERM PFGRYVYAIG GNEHATRLSG
VRVARVKLAV YTFAGLTSAL AAIVLTGRLM SGQPNAGVGF ELDAIAAVVM GGTSIAGGRG
SIVGTLVGAL LLGVLNNGLN MIGVNPYVQN VIKGAIILLA IYIGRERRK
|
|---|
| |