Gene BTH_I2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2253 
Symbol 
ID3846905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp2534047 
End bp2535222 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content70% 
IMG OID637841922 
Productribosomal large subunit pseudouridine synthase D 
Protein accessionYP_442774 
Protein GI83719070 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0564] Pseudouridylate synthases, 23S RNA-specific 
TIGRFAM ID[TIGR00005] pseudouridine synthase, RluA family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00391915 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGTT CAAGTTCGTT GAATGCCCGT GCGGGCAAGT CAAACCGCGA CGATTATAGC 
CCAAGCGCCA GCCCCGCCGA CGCTTCTGCA GGCGATTCGC TCGACGACGA TCTGTCGAGC
GACACGCTCG TCGCGCCCGC GGGCGCCGAT GCGCCGCGCG TCGTCGACGT ACCGCCCGCG
CTCGCGGGCG AGCGCCTCGA CAAGGCGCTC GCGCAGTTGT TCCCCGAGTT CTCTCGCAGC
CGCCTGCAGC AGTGGATCGA ATCGGAGCGT GTGCGCGTCG ACGGCGCGCC CGCGAAGATC
CGGCAGGCCG TGCCGCTCGG CGCGACGATC GAGCTGCTGC CGGATCTGCT GCCCGAGCAA
CTCGCGTTCA CGCCGGAGCC GGTGCCGCTT TCGATCGTCT ACGAGGACGA TACGATCGTC
GTCGTAGACA AGCCGGCCGG CCTCGTCGTC CACCCGGCCG CCGGCAACTG GAGCGGCACG
CTGCTCAACG GTCTGCTGCA CCGCTATGCG GATGCGGCCG GCCTGCCGCG CGCCGGGATC
GTGCATCGGC TCGACAAGGA GACGTCGGGC CTGATGGTCG TCGCCCGCAC GCTCGCCGCG
CAGACGGACC TGATCCGCCA ATTGCAGGCG CGCACGGTGA AGCGCCGCTA TTTCGCGCTC
GTGTGGGGGC AGATGCCCGA CGAAGGCACG ATCGACGCGC CGATCGGCCG CGATCCGCGC
GAACGCACGC GGATGGCGGT CGTCACGGGG GCGGCGGGCA AGCCGGCGCG CACGCATTTC
CGCACCGTCG ACACGACGCC GTGGGAGCGT CAGCCGGTAT CGGCGATCCA TTGCGATCTC
GAAACCGGGC GCACGCATCA GATCCGCGTG CATTGCGCGC ACGTCGGACA TCCGTTGCTC
GGCGATCCGG TGTACGGCCG CGCGCGCGGC AAGCGCTCGG TCGCGCCGCT GCCGGGCGGC
TTCGCGCGGC AGGCGCTGCA CGCATGGCGG CTCGGCCTCG TTCATCCGGC GACCGGCCGG
TCGATGCAAT GGCGCGCGCC GCTGCCGGCC GATCTCGCGG CGCTCGTCGA TGCGCTCGGC
TTCGGCGCGG ACGATGCGGA ATTCGGCGAC GACGACGCGG TCTATGACGA CGGTTACGAT
GGAGGCATCC CGCATGCCGA CGACGAAGAG GATTGA
 
Protein sequence
MTRSSSLNAR AGKSNRDDYS PSASPADASA GDSLDDDLSS DTLVAPAGAD APRVVDVPPA 
LAGERLDKAL AQLFPEFSRS RLQQWIESER VRVDGAPAKI RQAVPLGATI ELLPDLLPEQ
LAFTPEPVPL SIVYEDDTIV VVDKPAGLVV HPAAGNWSGT LLNGLLHRYA DAAGLPRAGI
VHRLDKETSG LMVVARTLAA QTDLIRQLQA RTVKRRYFAL VWGQMPDEGT IDAPIGRDPR
ERTRMAVVTG AAGKPARTHF RTVDTTPWER QPVSAIHCDL ETGRTHQIRV HCAHVGHPLL
GDPVYGRARG KRSVAPLPGG FARQALHAWR LGLVHPATGR SMQWRAPLPA DLAALVDALG
FGADDAEFGD DDAVYDDGYD GGIPHADDEE D