Gene BTH_I2090 details

Gene Information

• Locus tag: BTH_I2090
• Symbol: ispF
• ID: 3847250
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007651
• Strand: +
• Start bp: 2368381
• End bp: 2368869
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637841759
• Product: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• Protein accession: YP_442614
• Protein GI: 83718714
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
• TIGRFAM ID: [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase

Plasmid Coverage information

• Num covering plasmid clones: 33
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTCA GAATCGGACA AGGCTACGAC GTGCACCAGC TCGTTCCCGG ACGGCCGCTC 
ATCATCGGCG GCGTGACGAT CCCGTACGAG CGGGGGCTTC TCGGCCACTC GGATGCGGAC 
GTGCTGCTGC ACGCGATCAC CGACGCGCTG TTCGGCGCGG CGGCGCTCGG CGACATCGGC 
CGACATTTCT CCGACACCGA TCCGCGCTTC AAGGGCGCCG ACAGCCGCGC GCTCTTGCGC 
GAATGCGCGG CGCGCGTCGC GCAGGCGGGC TTTTCGATCC GCAACGTCGA CAGCACGATC 
ATCGCGCAGG CGCCGAAGCT CGCGCCGCAC ATCGACGCGA TGCGCGCGAA CATCGCGGCC 
GATCTCGGCT TGCCGCTCGA TCGCGTGAAC GTGAAGGCGA AGACGAACGA GAAGCTCGGC 
TATCTGGGCC GCGGCGAGGG GATCGAGGCG CAGGCGGCGG CGCTCGTCGT GCGCGAAGCG 
GCCGCGTGA 

 

Protein sequence

MDFRIGQGYD VHQLVPGRPL IIGGVTIPYE RGLLGHSDAD VLLHAITDAL FGAAALGDIG 
RHFSDTDPRF KGADSRALLR ECAARVAQAG FSIRNVDSTI IAQAPKLAPH IDAMRANIAA 
DLGLPLDRVN VKAKTNEKLG YLGRGEGIEA QAAALVVREA AA