Gene BTH_I2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I2017 
Symbol 
ID3848550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp2282395 
End bp2283657 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content71% 
IMG OID637841686 
Productsuccinyldiaminopimelate transaminase 
Protein accessionYP_442541 
Protein GI83721055 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID[TIGR03538] succinyldiaminopimelate transaminase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCTCA CGCCCGTGAA TCCTCGTCTC GACACGCTGC AGCCCTACCC GTTCGAAAAG 
CTCCGCGCGC TCTTTGCCGG CGTGACGCCA AGCGCGCATC TGCCGCCGAT CAGCTTCGGC
ATCGGCGAGC CGAAGCACGC AACGCCCGCG CTGATCCGCG ACGCCGCGGC CGCCGCGCTC
GACGGCCTCG CGTCGTATCC GGCGACGGCG GGCACCGATG CGCTGCGCGA GGCGCTCGCG
CGCTGGCTCG AGCGGCGCTA CGGGCTGCCC GCGATCGACG CGACGACGCA GGTTCTCGCC
GCGTCGGGCT CGCGCGAGGC GCTCTTCTCG CTCGCGCAGG CGGTGATCGA TTCGAGCCCG
CGCGGCAACC GCGACAAGCA AGGCGGCGAA TGCCAAAACG GCGAAAGGCC GATCGTACTC
TGTCCGAATC CCTTCTATCA AATCTACGAA GGCGCGGCGC TCCTCGCGGG CGCCGAGCCG
TACTTCGTCA ACAGCGATCC GGCGCGCAAC TTCGCGCCCG ATTATTCGGT CGTGCCGGCC
GACGTGTGGG CGCGCACGCA GCTCGTCTAC GTGTGCTCGC CGGGCAACCC GACGGGCGCC
GTGCTGACCC TCGACGACTG GCGCAAGCTC TTCGCGCTGT CGGACGAGCA CGGCTTCGTG
ATCGCGTCGG ACGAATGCTA TTCGGAGATC TACTTCGACG AGGCGAAGCC GCCGCTGGGC
GGCCTCGAGG CCGCGCACAA GCTCGGCCGC GGGTTCGAGC GCCTCGTGAT GCTGTCGAGC
CTGTCGAAGC GCTCGAACGT GCCGGGCATG CGCTCGGGTT TCGTCGCGGG CGACGCGGCG
CTCCTCAAGC GCTTCCTGCT GTACCGCACC TACCACGGCG CGGCGCTGTC GCCCGTCTGG
CAGAAGGCGA GCGTCGCCGC CTGGGGCGAC GAGGCGCACG TGCGCGAGAA CCGCGCGCTC
TACGCGCAGA AGTTCGCGAC CGTCACGCCG ATGCTCGCCG ACGTCGTCGA CGTGCGCCTG
CCCGACGCCG CGTTCTACCT GTGGGCGAAC GTCGCGCGAA CCGGCCTGTC GGACACCGAG
TTCGCCCGGC GCCTCTACGC CGACTATAAT GTGACGGTCC TGCCCGGCTC GTATCTCGCC
CGCGACGCGC ACGGCGCGAA TCCCGGCCGC GACTTCGTCC GGATCGCGCT CGTCGCCGGC
ACGGCCGAAT GCGCCGAAGG CGCGCAGCGC ATCGTCGATT TCTGCCGCGG CCTCGCCCGC
TGA
 
Protein sequence
MSLTPVNPRL DTLQPYPFEK LRALFAGVTP SAHLPPISFG IGEPKHATPA LIRDAAAAAL 
DGLASYPATA GTDALREALA RWLERRYGLP AIDATTQVLA ASGSREALFS LAQAVIDSSP
RGNRDKQGGE CQNGERPIVL CPNPFYQIYE GAALLAGAEP YFVNSDPARN FAPDYSVVPA
DVWARTQLVY VCSPGNPTGA VLTLDDWRKL FALSDEHGFV IASDECYSEI YFDEAKPPLG
GLEAAHKLGR GFERLVMLSS LSKRSNVPGM RSGFVAGDAA LLKRFLLYRT YHGAALSPVW
QKASVAAWGD EAHVRENRAL YAQKFATVTP MLADVVDVRL PDAAFYLWAN VARTGLSDTE
FARRLYADYN VTVLPGSYLA RDAHGANPGR DFVRIALVAG TAECAEGAQR IVDFCRGLAR