| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1982 |
|---|
| Symbol | |
|---|
| ID | 3847184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 2248751 |
|---|
| End bp | 2249455 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637841651 |
|---|
| Product | NLP/P60 family protein |
|---|
| Protein accession | YP_442511 |
|---|
| Protein GI | 83718648 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000770897 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCACC GATATCTGAC CCAGGCTTGT ACGCGCGTCG TCGCCGGGAT GTTCGTCGGC
GTTCTGATCG CTGCAGCTCC CGGCGCGTTC GCCGACGAAG TCAGCAGTTC CAGTCAGAAT
GCGATCAGTT CGGCTCAATC GGAGCCGGCT TCCTCCTCCC AGAATCTCCA GCAGGTCAGT
GCCGCGACGC CCGCGAAGAG CCAGGGTGGC GCGAAGGCGT TCCTGTCGGG CATGGCCGGC
AAGGCGGGCG ACGTCGTCGT CGGCGCGCTG AACATGATCG GCGTGCGCTA CCGCTGGGGC
GGCAACACGC CGGATTCGGG CCTCGATTGC AGCGGCTTCG TCCGTTATGT GTTCCAGGAC
ACGCTCGGCA TGTCGCTGCC GCGTCGCGCG GAGGAAATGA GCCGCGTCGG CGAGAAGGTG
CGCATGAGCG AACTGAAGCC GGGCGACCTC GTGTTCTTCA ACACGATGCG CCGCACGTTC
TCGCACGTCG GCATCTATAT CGGCGACAAC AAGTTCGTGC ACTCGCCGTC GACGGGCAGC
ACGATCCGCG TCGACGATCT CGACAGCAGC TACTGGGAAA AGCGTTTCAC CGGCGCGCGC
CGGATCGAGA CGCAGTTCTC GACGAAGCCC GACGATCTGC GCCAGCGCGT GAAGGCGACG
ATCGGCGACG GCGGCGTCGG CGCGAGCGCG AACGGCAGCA ACTGA
|
|---|
| Protein sequence | MQHRYLTQAC TRVVAGMFVG VLIAAAPGAF ADEVSSSSQN AISSAQSEPA SSSQNLQQVS
AATPAKSQGG AKAFLSGMAG KAGDVVVGAL NMIGVRYRWG GNTPDSGLDC SGFVRYVFQD
TLGMSLPRRA EEMSRVGEKV RMSELKPGDL VFFNTMRRTF SHVGIYIGDN KFVHSPSTGS
TIRVDDLDSS YWEKRFTGAR RIETQFSTKP DDLRQRVKAT IGDGGVGASA NGSN
|
|---|
| |