Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I1708 |
Symbol | |
ID | 3847945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 1918986 |
End bp | 1920419 |
Gene Length | 1434 bp |
Protein Length | 477 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637841377 |
Product | ribosomal large subunit pseudouridine synthase C |
Protein accession | YP_442243 |
Protein GI | 83719283 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.127697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGGC TCGGCCGCAG CGGGGAGTAT CGAATCCAGC CCGACTTTCC CGCCTGGGGT GTTCCTTCCT TGGTTTTGAC GTCGCCAAGC CCCGCGCTCT CGCGGAGCCA CATCGGGCGC ACGCCGTTCT ATTCGCAACA GGAAACTGCG CCGGGCTTAC ATCGCGCCGC GCCGCAGCCT CCAACAAATT CTTTTTGTCC AACATTCCGT TACCGCGGCA CGGCTCAAAC CGAATCCGCC TGTGGGCGCG ATCCCTGCCT GAGCGGGGTG CCGTGCGTGC AACTTGCTGC TTTCATTCAT GAGGACGAGC AGCACGCCCC GGGCGCAAGT AAAATAACAG TTTGCGCTTG CGCCTCGCGC AGTCCGTCCG AAAACCGGCC GATCAGGCCG CTCCGCTACG GAAGGCTGCG CAAAATTATA TTCAGTATGA ATGAGTTAGG CAAAAAATCC CATAATTCGG TCGCAAGCGG TCAGGTTTCG CTCATCGAGA TCGACGAAAG CGCCGCCGGG CAGCGCATCG ACAACTTCCT GCTGCGCGTC TGCAAGGGCG TGCCGAAGAG TCATATTTAC CGAATCCTGC GCAGCGGCGA AGTCCGCGTG AACAAGGGCC GGATCGATGC GCAATACCGG CTCGCGTTCG GCGACGTCGT GCGTGTGCCG CCCGTGCGCG TCGCGGCGGC CGACCTCGCG CGCGCGGCAG GCCCCGCGCC CGTGCCCGCG GCGGAATTCG AGATCCTGTT CGAGGACGAC GCGATCATCG CGCTGAACAA GCCGGCGGGC GTCGCCGTGC ACGGCGGCAG CGGCGTCGCG TTCGGCGTGA TCGAGCAGAT GCGCCACGCG CGGCCGCACG CGAAGTTCCT CGAACTCGTG CACCGGCTCG ACCGCGAGAC CTCGGGCATC CTGATGCTCG CGAAGAAGCG CTCCGCGCTC GTCGGGCTGC ACGAGCAGAT TCGCGAGAAT CGGATGGACA AGCGCTACTT CGCTTGCGTG CACGGCGACT GGGCGGCCGA CTGGGGCCGC CGCCGCGCGG TGAAGGCGCC GCTTTTCAAG TACGCGACGC CCGACGGCGA GCGGCGCGTG CGGGTCCAGG AGGACGGGCT GCCGTCGCAC ACGGTGTTCA ATCTCGTCGA CCGCTGGCCG GACTACGCGC TCGTCGAAGC GGAACTCAAA ACGGGTCGGA CCCATCAGAT CCGTGTGCAC CTCGCGCATC TCGGCCTGCC GATCGTCGGC GACGCCAAGT ATGGCGATTT CGCGCTGAAC AAGGCGCTTG CGCGCGCGAG CGCGGTGCCG TCGATCAAGC GGATGTTCCT GCACGCGCAC CGGTTGCGCC TCGCGCATCC GCTGACGGGC GAGCCGCTGC AGTTCGACGC GCCGCTGCCC GCCGAGTGCC GGCAATTCCT CGATCAACTC ACCGACTTGC GCGATACCGC ATGA
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Protein sequence | MLRLGRSGEY RIQPDFPAWG VPSLVLTSPS PALSRSHIGR TPFYSQQETA PGLHRAAPQP PTNSFCPTFR YRGTAQTESA CGRDPCLSGV PCVQLAAFIH EDEQHAPGAS KITVCACASR SPSENRPIRP LRYGRLRKII FSMNELGKKS HNSVASGQVS LIEIDESAAG QRIDNFLLRV CKGVPKSHIY RILRSGEVRV NKGRIDAQYR LAFGDVVRVP PVRVAAADLA RAAGPAPVPA AEFEILFEDD AIIALNKPAG VAVHGGSGVA FGVIEQMRHA RPHAKFLELV HRLDRETSGI LMLAKKRSAL VGLHEQIREN RMDKRYFACV HGDWAADWGR RRAVKAPLFK YATPDGERRV RVQEDGLPSH TVFNLVDRWP DYALVEAELK TGRTHQIRVH LAHLGLPIVG DAKYGDFALN KALARASAVP SIKRMFLHAH RLRLAHPLTG EPLQFDAPLP AECRQFLDQL TDLRDTA
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