| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1582 |
|---|
| Symbol | |
|---|
| ID | 3849359 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 1782100 |
|---|
| End bp | 1783317 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637841252 |
|---|
| Product | coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_442123 |
|---|
| Protein GI | 83720503 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.229924 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG CGGCAACCAA CGGCGCGCGC GTCGTCGCGA CATTCGCCGC GCCCGGCAAG
ATCCGGCTCG CGTCGCTGCC GCCGCTCGCA CTGTACGTTC ACTTCCCGTG GTGCGTGCGC
AAGTGCCCGT ACTGCGACTT CAATTCGCAC GAATGGAAGG ACGGCGGCGC GCTGCCCGAG
CACGATTATC TCGACGCGCT GCGCGCCGAT CTCGAACATG CGCTGCCGCT CGTCTGGGGA
CGCCAGGTGC ACACGGTGTT CATCGGCGGC GGCACGCCGA GCCTGCTGTC GGCGGCGGGG
CTCGACCGGC TGCTGTCCGA CGTGCGCGCG CTACTGCCGC TCGACGCGGA CGCCGAGATC
ACGCTCGAGG CGAACCCCGG CACGTTCGAG GCGGCGAAAT TCGCGCAATT CCGCGCGAGC
GGCGTCAATC GTCTGTCGAT CGGCATCCAG AGCTTCAACG AAGCGCATCT GAAGGCGCTC
GGGCGAATCC ACGACGCCGC GCAGGCGCGC GCCGCGGTCG AGATCGCCGC GCGCACGTTC
GAGAACTTCA ATCTCGACCT GATGTTCGCG CTGCCGAACC AGACGCTCGA CGAATGCCGC
GCGGATCTCG AGACCGCGCT CACGTTCGCG CCGCCGCATC TGTCGCTTTA TCACCTGACG
CTCGAGCCGA ATACGTACTT CGCGAAATTT CCGCCCGCCG TACCGGACGA CGACGCGTCG
GCCGACATGC AGGACTGGTT GCACGAGCGC ACCGCGCAGG CGAGCTACGC GCGCTACGAG
GTGTCGGCTT ACGCGAAGCC GCATCGGCAG AGCAAGCACA ACCTCAACTA CTGGTGCTTC
GGCGACTATC TCGGGATCGG CGCGGGCGCG CACACGAAGC TGTCGTTTCC GAACCGGATC
CTGCGCCAGG CGCGCTACAA ACATCCGGCG ACGTTCATCG AACAGGCGAA AGCGGGTGCG
GCGGTGCAGG AAGAGCGGGA GGTCGGCCCG CGCGATCTGC CGTTCGAGTT CATGCTGAAC
GCGCTGCGGC TCGTCGACGG CGTGCCCACC CACAGCTTCG CGGAGCGCAC GGGCATGTCG
CTCGCGTCGA TCGGGCCCGC GCTCGCGCAA GCGCAGCAGC GTGGCCTCAT CGTGCACGAT
CACACGCGCA TCGCGCCGAC GCCGCTCGGC CAGCGTTTCC TCAACGATCT GCAGGCGCTT
TTCCTGCGCG ACGAATGA
|
|---|
| Protein sequence | MSDAATNGAR VVATFAAPGK IRLASLPPLA LYVHFPWCVR KCPYCDFNSH EWKDGGALPE
HDYLDALRAD LEHALPLVWG RQVHTVFIGG GTPSLLSAAG LDRLLSDVRA LLPLDADAEI
TLEANPGTFE AAKFAQFRAS GVNRLSIGIQ SFNEAHLKAL GRIHDAAQAR AAVEIAARTF
ENFNLDLMFA LPNQTLDECR ADLETALTFA PPHLSLYHLT LEPNTYFAKF PPAVPDDDAS
ADMQDWLHER TAQASYARYE VSAYAKPHRQ SKHNLNYWCF GDYLGIGAGA HTKLSFPNRI
LRQARYKHPA TFIEQAKAGA AVQEEREVGP RDLPFEFMLN ALRLVDGVPT HSFAERTGMS
LASIGPALAQ AQQRGLIVHD HTRIAPTPLG QRFLNDLQAL FLRDE
|
|---|
| |