| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I1125 |
|---|
| Symbol | lpxC |
|---|
| ID | 3848846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 1270562 |
|---|
| End bp | 1271509 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637840797 |
|---|
| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
|---|
| Protein accession | YP_441673 |
|---|
| Protein GI | 83720262 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
|---|
| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATATCCT CAATCAAGAA GACTGTGACC ATGTTGAAGC AGCGCACCAT CAAATCGATC
GTCAAGACTG TCGGCATCGG CCTGCACTCG GGCCGCAAGG TCGAACTGAC GCTTCGCCCC
GCGGCGCCGG ACACGGGCAT CGTGTTCTCG CGCGTCGATC TGCCGACGCC CGTCGACATT
CCGGCTTCGG CGCTGTCGAT CGGCGACACG CGGCTCGCGT CCGTGCTGCA GAAGGACGGC
GCGCGCGTGT CGACGGTCGA GCATCTGATG TCGGCGTGTG CGGGCCTCGG CATCGACAAC
CTCTACGTCG ACGTGACGGC CGAGGAAATC CCGATCATGG ACGGCAGTGC GGCGTCGTTC
GTGTTCCTGA TCCAGTCGGC CGGCATCGAA GAGCAGAACG CGGCGAAGAA GTTCATCAAG
GTGACGAAGC CCGTCGAGAT TCGCGACGGC GACAAGTTCG CGCGTCTCGA TCCCTACTTC
GGCTTCAAGC TGAAGTTCAC GATCGATTTC CGCCATCCGG CCGTCGACAA GACGGGCCAG
GAACTCGAGG TTGACTTCGC GAACACGTCG TACGTGCGCG AGATCGCGCG CGCGCGCACA
TTCGGCTTCG CGCACGAGGT CGAGATGATG CGCGAGCTCG GGCTGGCGCG CGGCGGCAGC
ATGGACAACG CGATCGTGCT CGACGAATAC CGGATTCTCA ATAACGACGG ACTCCGCTAC
GACGACGAGT TCGTCAAGCA CAAGATGCTC GACGCGATCG GCGATCTGTA CGTGGTCGGC
CATCCGCTCC TCGCGTCGTA CACCGCGTAC AAGTCGGGCC ACGGGCTGAA CAATGCGCTG
CTGCGCGAGC TGCTCGCGCA CGAGGACGCC TACGAGATCG TGACGTTCGA CGATCCGAAG
GCGGCGCCGA CGGGCTTCGG CTTCGACGCG CAGACGGCAT TCGCGTGA
|
|---|
| Protein sequence | MISSIKKTVT MLKQRTIKSI VKTVGIGLHS GRKVELTLRP AAPDTGIVFS RVDLPTPVDI
PASALSIGDT RLASVLQKDG ARVSTVEHLM SACAGLGIDN LYVDVTAEEI PIMDGSAASF
VFLIQSAGIE EQNAAKKFIK VTKPVEIRDG DKFARLDPYF GFKLKFTIDF RHPAVDKTGQ
ELEVDFANTS YVREIARART FGFAHEVEMM RELGLARGGS MDNAIVLDEY RILNNDGLRY
DDEFVKHKML DAIGDLYVVG HPLLASYTAY KSGHGLNNAL LRELLAHEDA YEIVTFDDPK
AAPTGFGFDA QTAFA
|
|---|
| |