Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I1024 |
Symbol | kdpD |
ID | 3848362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 1161773 |
End bp | 1164880 |
Gene Length | 3108 bp |
Protein Length | 1035 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637840696 |
Product | two-component system, sensor kinase protein KdpD |
Protein accession | YP_441578 |
Protein GI | 83718958 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2205] Osmosensitive K+ channel histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGTC CCGATCCTGA CCAGCTTCTC GACAAGATCC AGCGGGAAGA GGAAAAGCAG CAGCGCGGCA AGCTGAAGAT CTTCTTCGGC GCGTCGGCGG GCGTCGGCAA GACCTATGCG ATGCTGCTCG CCGCGCGCGC GCGCAAGCAG GAGGGCGTCG ACGTCGTCGT CGGCATCGTC GAGACGCACG GGCGCAGCGA GACGGCGTCG CTGCTCGACG GGCTCGACGT GCTGCCGCTC ATGCAGATCG AGTACCGCGG CCGCACGATC GGCGAGTTCG ATCTCGACGC GGCGCTCGCG CGCAAGCCGC AGCTCGTGCT CGTCGACGAG CTCGCGCACT CGAACGTGCC GGGCGCGCGC CACCTGAAGC GCTGGCAGGA CGTGTACGAG TTGCTCGACG CGGGCATCGA CGTCTACACG ACCGTCAACG TCCAGCATCT CGAGAGCCTG AACGACGTGG TCGGCGCGAT CACGGGCATC CGCGTGTGGG AGACCGTGCC CGACCGCGTG TTCGACGTCG CCGACGAAGT CACGCTCGTC GACCTGCCCG CCGAGGAACT GCTGAGCCGG CTGCGCGAAG GCAAGGTCTA CATGGCGCAG CAGGCCGAGC GGGCGGTGCG CAATTTTTTC CGCAAGGGCA ACCTGATCGC GCTGCGCGAG CTCGCGCTGC GCCGCACGGC CGACCGCGTC GACGCGCAGA TGCGCGAGTA CCGCGCGGAC CGCTCGATCC AGCGGATCTG GCAGGCGCGC GAGCGCCTGC TCGTGTGCGT GGGCCCGGGC CCCGAGGCGC CGACGCTCGT GCGCGCGGCC GCTCGCCTCG CGGCGAGCCT GAAGGCCGAC TGGCTCGCGG TGTACGTCGA GACGCCGCGG CTCGCGCGGC TGCCCGACGC GCTCCGGCAG CGCACGCTCA ACGCGTTGAA GCTCGCGGCC GAGCTCGGCG CCGAGACGGC GACGCTCACG GGCGCGGACG CGGTCGCCGC GCTGATCGGC TACGCGCAGG TGCGCAATGC GTCGAAGATC GTCGCGGGCG GCTCGTCGAA GACGGGTTTC CTGCGCCGTT TCTCGCGCCC GTTCGGCGAA CGGCTCGCGG AGCGCGCGGG CGACGTCGAC CTGATGCTGA TCCGCGCATC GGCGGGCGAG GACGCGCGCA CGCCGCTCGA TGCGGGCGCG CGCGCGTGGC GCGATACACT CTCGAGCGTC GTCGACGGCC GCTCGCCGCC GCGCAACTAC GGCTACGCGG CCGCGATCTG CGCGCTGATC ACGGGCGTCG CGAACCTGCT GCAGGGCCAT CTCGACCTGA CGAACCTCGT GATGCTGTAC CTGCTCGGCG TCGTGTTCTC GGCGGTGCGT CTCGGGCGCG GGCCGGGCGT CGTGCAGTCG TTCCTGTCGG TTGCCGCATT CGACTACTTC TTCGTGCCGC CGCGGATGTC GTTTTCCGTG ACGGACACGC AGTATCTGCT GACCTTCTTC GGGATGCTGC TCACGTCGCT CGTCATCAGC CATCTGACGT CGAGCCTTAC GCGCGGCGCG ACGATCGCGC AGCGGCGCGA GCGGCGCACG AGCGCGATGT ACGCGATGGC GCGCGAGCTC GGGGCGGCGC TCACGGCCGA GCAGATCGTC GAGATCGGCA GCCGCCACGT GTCCGAGGTG TTCCGCGCGC GCGTCGCGAT CCTGCTGCCG GACAGCGGCG ACAAGATCCA GCAGAAGATC GAGAATCCCG ACGAGGCGGT GACGATCACG GGCGCGGCGC TCGACATCGA CGTCGGCCAA TGGGTGTACG ACCAGCAGAA GCCGGCCGGG CACGGCACCG ACACGCTGCC CGCGGCCACC GCGCTTTATC TGCCGCTGAA GGCGCCGATG CGCACGCGCG GCGTGCTCGC CGTCGTCACG AAGGACCCGG GCGAGCTCGA GGTGCCCGAG CAGCAGCGGA TGCTCGACGC GTTCGCCGCG CAGATCGCGC TCGCGGTCGA GCGCGTTCAC TACGTCGAGA TCGCGCGCGA CGCGCTCGTC AACATGGAAT CGGAGCGGTT GCGCAACTCG CTGCTGTCGG CGATCTCGCA CGATCTGCGC ACGCCGCTCA CGGCGATCGT CGGCTTGTCG TCGATGCTCG CGAACGCGCG CGGCGGCGGT TCGTCCGCGC GCGAGGACGA ACTCGTCGAA TCGATCCACG ACGAGGCGCT CAGGATGACG GGGATCGTCA CGAACCTGCT CGACATGGCG CGCCTGCAGG CGGGCAGCCT GCAGTTGAAG CGCCAGTGGT CGCTGCTCGA GGAGACGGTC GGCGCGGCGC TCGCCGCGTG CAAGCGCGTG CTCGCGCGTC ATCCGGCGCG CGTGCGGCTG CCCGCCGATC TGCCGCTCCT GCAGACGGAC GCGGTGCTGA TGGAGCGGCT TTTCGCAAAC CTGTTCGAGA ACGCGGCGAA ATACACGCCG CTCGACACGC CGATCGAGAT CGGCGCGGAG CGCATCGTCG ACGACAGCCG GCCGTTCGTG CGCGTGTTCG TCGACGACCA CGGCCCGGGG CTGCCGGCCG GCATGGAGGC GCGGATCTTC GAGAAGTTCA CGCGCGGCGA GAAGGAATCG GCGACGCCCG GCATCGGGCT CGGGCTTGCG ATCTGCCGCG CGATCGTCGA CGCGCACGGC GGTAAAATCG GCGCGCTCAA CCGGCTCGGG CCGGATGGCA AGGTCGAGGG CGCGCGCTTC TGGTTCACGC TGCCCGTCGA CACGCCGCCG CCCGAACCCG GCGCCGGCGA CGACGCGCCG GACGACGAAG CGGGCGAGGC AGGCGCGGCG GGCGCAGCGG CGGGGGGCGC AGATGAAGCG GCCGCCGGCG GGCCGTCGGC GGGCGAGCCG CCGGCGGGTG CGGGTTCGCG CTCCGTGTTC GGCGATCGCT TCGCCGCTGC GCGTGCGGCG GGAGAATTCG ACGCCGAGGA GCGCACGGCC GGCGAACGCG AGAGCGGCGG TCGCACGGCC GGCGATCGCG CGCCCGACGC GGCTGCGGAC CCTGCCCGCC CGGCGTCCGG CCAAGCCGCT GCGGCGTCTT CCGCGCCGCG CCGCGCCGAG GGAGCGCCGT CGCCCGTATC CAACGAACAT CCGCATGCCC ATGAGTGA
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Protein sequence | MNRPDPDQLL DKIQREEEKQ QRGKLKIFFG ASAGVGKTYA MLLAARARKQ EGVDVVVGIV ETHGRSETAS LLDGLDVLPL MQIEYRGRTI GEFDLDAALA RKPQLVLVDE LAHSNVPGAR HLKRWQDVYE LLDAGIDVYT TVNVQHLESL NDVVGAITGI RVWETVPDRV FDVADEVTLV DLPAEELLSR LREGKVYMAQ QAERAVRNFF RKGNLIALRE LALRRTADRV DAQMREYRAD RSIQRIWQAR ERLLVCVGPG PEAPTLVRAA ARLAASLKAD WLAVYVETPR LARLPDALRQ RTLNALKLAA ELGAETATLT GADAVAALIG YAQVRNASKI VAGGSSKTGF LRRFSRPFGE RLAERAGDVD LMLIRASAGE DARTPLDAGA RAWRDTLSSV VDGRSPPRNY GYAAAICALI TGVANLLQGH LDLTNLVMLY LLGVVFSAVR LGRGPGVVQS FLSVAAFDYF FVPPRMSFSV TDTQYLLTFF GMLLTSLVIS HLTSSLTRGA TIAQRRERRT SAMYAMAREL GAALTAEQIV EIGSRHVSEV FRARVAILLP DSGDKIQQKI ENPDEAVTIT GAALDIDVGQ WVYDQQKPAG HGTDTLPAAT ALYLPLKAPM RTRGVLAVVT KDPGELEVPE QQRMLDAFAA QIALAVERVH YVEIARDALV NMESERLRNS LLSAISHDLR TPLTAIVGLS SMLANARGGG SSAREDELVE SIHDEALRMT GIVTNLLDMA RLQAGSLQLK RQWSLLEETV GAALAACKRV LARHPARVRL PADLPLLQTD AVLMERLFAN LFENAAKYTP LDTPIEIGAE RIVDDSRPFV RVFVDDHGPG LPAGMEARIF EKFTRGEKES ATPGIGLGLA ICRAIVDAHG GKIGALNRLG PDGKVEGARF WFTLPVDTPP PEPGAGDDAP DDEAGEAGAA GAAAGGADEA AAGGPSAGEP PAGAGSRSVF GDRFAAARAA GEFDAEERTA GERESGGRTA GDRAPDAAAD PARPASGQAA AASSAPRRAE GAPSPVSNEH PHAHE
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