Gene BTH_I0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0990 
Symbol 
ID3850044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp1127638 
End bp1129014 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content69% 
IMG OID637840662 
Productlipopolysaccharide core biosynthesis heptosyltransferase 
Protein accessionYP_441544 
Protein GI83721186 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02201] lipopolysaccharide heptosyltransferase III, putative 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGCTGCG CGCGGCGCTG GTCGCGCACG CGTCGCGCAA GATCCAGTCG TTCGGCCCGC 
ATGCGGCGAA CGCGCGCATG CAGGCGCTCG CCGCGCAATT GCTCGAGTCG GCTTGAGCGC
GCCCGCGCCG CCAGGGCGCG CGGCGCGAAT TCGCTAAAAT GTCCAGTCGC TCTTCTTCAT
GCCTTCACCG TGACCGCTTC GTTGACGCTC CTCCGGCCGC CGCGCACCAT CCTCGTGTCC
TGTACGCGCC GCCTCGGCGA CGTGCTGCTG ACGACGCCGC TCGTCCGCTC GCTGAAGGCG
CGCTGGCCCG ACGCGCAGAT CGACATGATC GTGTTTCAGG GCACCGAAGG CGTGCTCGAG
CACAATCCCG ATATCCGCCG TGTGATCACG GTCGCGCAGC GTGCGCGACC GAAAGAGCGC
ATTGCCGACG CGCTGCGCAT TTGGCGCAAG TACGATCTCG CGTGCGCTGC GATCAGTTCC
GATCGCGCGC GCTTCTACGC GTTCTTCGCG GGTCGCAGGC GGATCGGGCT CGTCGATCCC
GAGCGGCTCA CGCGGCTCAC GCGCTTCATC CTGAACGGTG TCGTGCTCGA CGAGCATCGC
GACGTCCATA CTGTCACGAG CAATTTGTCG CTTGCCGGCG CGCTCGGCGT GACGCCGTGC
GCCGACGTCG TCGCGCCCGG TATCGGCGAC GATCCCGCCG CACATGCGCG CTTCGATGCG
AAGCTGTACG GGACATCCGC GCTGCTGCGC GACGAGCCGT ACGTCGTGTT GCATCCGTAT
CCGATGTTTC GCTACAAGCG CTGGCGCGAG GACGGCTGGG TTGATCTCGT GCGCTGGGCG
CGCAGCCGGG GGCTTGCGGT TGCGCTGAGC GGCGGTCCCG CGCAGGCCGA GTGCGACTAT
GCGGCGCGGA TCGCGCAAGC GGCGGGCGAG CCCGTGTTGA ACATGGCAGG CAAACTGTCG
TTCGGCGAGA GCGCCGAGAT GTTCCGGCGC GCGCGGCTCT TCATCGGCCC GGACACCGGC
GCAACGCACG TTGCCGCTGC CTGCGGCGTT CCGACGATCG CCCTCTTCGG GCCGTCGAAT
CCGACGCGCT GGGGCCCGTG GCCCGCGCAT TGGCCGGCCG GTAGCGAGCC GTGGCCGCTG
CGAGGCTCGC AGCGGTGCGG CAACGTGTAT TTGCTGCAGG GCGAAGGCGA TTGCGTGCCG
TGCAAGCTCG AAGGTTGCGA CCGCCATCTG GACAGCTGGA GTCGATGCCT GACCGAATTG
CCGTCGGCCC GCGTGATCGG CGCTGCGGCC GCGATGCTCG GACTCGATGC GGCGAGCGCG
CAGACTACTG GCATTGCGAT GTCGGTCGAC GTCAGCCGGC TCAAGGCGGG CAAGTAG
 
Protein sequence
MCCARRWSRT RRARSSRSAR MRRTRACRRS PRNCSSRLER ARAARARGAN SLKCPVALLH 
AFTVTASLTL LRPPRTILVS CTRRLGDVLL TTPLVRSLKA RWPDAQIDMI VFQGTEGVLE
HNPDIRRVIT VAQRARPKER IADALRIWRK YDLACAAISS DRARFYAFFA GRRRIGLVDP
ERLTRLTRFI LNGVVLDEHR DVHTVTSNLS LAGALGVTPC ADVVAPGIGD DPAAHARFDA
KLYGTSALLR DEPYVVLHPY PMFRYKRWRE DGWVDLVRWA RSRGLAVALS GGPAQAECDY
AARIAQAAGE PVLNMAGKLS FGESAEMFRR ARLFIGPDTG ATHVAAACGV PTIALFGPSN
PTRWGPWPAH WPAGSEPWPL RGSQRCGNVY LLQGEGDCVP CKLEGCDRHL DSWSRCLTEL
PSARVIGAAA AMLGLDAASA QTTGIAMSVD VSRLKAGK