Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0717 |
Symbol | pdxH |
ID | 3847338 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 826440 |
End bp | 827237 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637840390 |
Product | pyridoxamine 5'-phosphate oxidase |
Protein accession | YP_441273 |
Protein GI | 284159415 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.000096585 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCGG TGCGAGACAT ACAAGCTGAT CGAAAGGAAA CGGATAGCCC GTTATTTTGC CTGATCGACC GGCGGCAATC ACGCGCCGAA CCACTGCAAC GCAGGTTTTT TCCACCTTCG CTATACTGGC CCCGATTGAG CGTTCGCACA CCAATGACGA CACTTGCCGA TCTCCGCACC AACTACTCCC GCGCGTCGCT CGACGCGGCG GACGTGAACC CGAATCCGTT CGTCCAGTTC GACGTCTGGT TCAAGGAAGC GCTCAGCGCG CAGTTGCCCG AGCCCAACAC GATGACGCTC GCGACCGTCG ACGAAGCCGG GCGGCCGTCC GCGCGGATCG TCCTCATCAA GGGCGTTGAC GAGCGCGGCT TCGTGTTCTT CACGAACTAC GAGAGCCGCA AGGGGCGCGA GCTCGCGCAC AACCCGAACG CGGCGCTGCT CTTCTACTGG ATCGAGCTCG AGCGGCAGGT TCGCATCGAG GGGCGCATCG AGAAGACGAC CGAAGAGGAA AGCGACCGGT ATTTCGCGTC GCGCCCACTC GGCTCGCGGA TCGGCGCCTG GGCGTCCGAG CAGAGCGCGG TGATCGAAAG CCGCGCGCTG CTCGAGGCGC GCGAGAAGGA AATCAGCGCG CGCTTCGGCG AAAATCCGCC GCGCCCGCCG CACTGGGGCG GCTACCGTCT CGTGCCGAGC ACGATCGAAT TCTGGCAGGG CCGCCCGTCG CGGCTCCACG ACCGCCTGCT GTATACGCGC GACGCCGCGT CGGCGAGCGG CTGGAGAATC GCGCGCCTCG CGCCGTAA
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Protein sequence | MASVRDIQAD RKETDSPLFC LIDRRQSRAE PLQRRFFPPS LYWPRLSVRT PMTTLADLRT NYSRASLDAA DVNPNPFVQF DVWFKEALSA QLPEPNTMTL ATVDEAGRPS ARIVLIKGVD ERGFVFFTNY ESRKGRELAH NPNAALLFYW IELERQVRIE GRIEKTTEEE SDRYFASRPL GSRIGAWASE QSAVIESRAL LEAREKEISA RFGENPPRPP HWGGYRLVPS TIEFWQGRPS RLHDRLLYTR DAASASGWRI ARLAP
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