Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0682 |
Symbol | |
ID | 3849873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | + |
Start bp | 784246 |
End bp | 785805 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637840355 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_441238 |
Protein GI | 83718989 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.323921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAA AACATGCTTT GACTGCACTC GCAGTCGCGC TGCTCGCCGC GGGCTGCACG CTCGCGCCGC GCTACGAGCG TCCGGCCGCG CCCGTGTCGG GCGCGTTCCC GACCGACGGC GTCTACGCCG CGCAGCCGGG CGCCGCGGCC GGCGCGCGCA GCGCGAACGG CCAGGCGGCC GTCGACATCG GCTGGCGCGA GTTCTTCGTC GATCCGCGCC TGCAGCGGCT GATCGAGATC GCGCTGAAGA ACAACCGCGA TCTGCGCGTG TCGGTGCTCA ACGTCGAGGC GTCGCGCGCG CAGTATCGGA TCACGCGCGC GGGCCTGTTC CCGACGCTCG ACGGCACCGG CACGGGCACG ATCCAGCGCA CGCCGGCCGG TGTGTCGGTA ACCGGCCAGC CGCTCATCTC GCGGACCTAC AATGTCGGCG TGTCCGCGTC GTGGGAGCTC GACCTGTTCG GCCGCGTGCA GAGCCTGAAG GATCAGGCGC TCGCGCAATA CTTCGCGACC GCGCAGGCGC GCAAGGCCGC GGAGATCTCG CTCGTCGCGA GCGTCGCCGA TCAGTATCTG ACGCTGCTGT CGACCGACGA TCTGCTGCAG ATCACGGAGA ACACGCTGAA GACGGCGCGC GCGTCGTACG ACCTGACGAA GCTGCAGTTC GACAACGGCA CCGGCTCGGA GCTCGATCTG CGGCAGGCGC AGACGGTCGT CGAGACCGCG CTCGCGAACC AGCAGGCGCA GGCGCGCGCC CGCGCGCAGG CGGTCAACGC GCTCGTGCTG CTGATCGGCG AGCCGCTGCC CGACGATCTG CCGGCCGGCC TGCCGCTCAA TGCGCAGAAT CTGCTGACCG ACATCCCGGC CGGGCTGCCG TCCGATCTGC TGACGCGCCG CCCCGACATC ATGCAGGCCG AGGAGACGCT GCGCGCGGCG AACGCGAACA TCGGCGCGGC GCGTGCGGCG TTCTTCCCGA AAATCTCGCT CACCGGCGCG TTCGGCACCG CGAGCCCGAC GCTCGGCGGC CTGTTCAAGG CGGGCACGGC GGCGTGGTCG TTCGCGCCGA GCATCGCGCT GCCGATCTTC GAGGGCGGAC AGAACATCGC CAATCTCGAT CTCGCGCACG TGCAGAAGCG CATCGAGATC GCGAACTACG AGAAGGCGAT CCAGAGCGCG TTCCGCGAGG TGTCGGACGG GCTTGCCGCG CGCGGCACGT ACGATCAGCA GATCGCGGCG CTCGAGCGCA ACGAGCACGC GCAGCAGCGC CGCTACGATC TGTCGGACCT GCGCTACAAG AACGGCGTCG ACAGTTATCT GTCGGTGCTG ACCGCGCAGA CGGATCTGTA TTCGGCGCAG CAGCAACTGA TCAGCGCGCG GCTCGCGCGC TGGACGAACC TCGTCGATCT GTATCGCGCG CTGGGCGGCG GCTGGATCGA ACGCGCGGGC GAGACGCCGC GCCCGGCGGA TGCGCCTGTC GACTACGGCA AGGCGGCAGC GCCTGCGCCG GCGTCGGCGT CGGCGTCGGC GGCGCCCGCT GCGGCGGCCA GCGCGCCGGC GGCCGGCTGA
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Protein sequence | MKRKHALTAL AVALLAAGCT LAPRYERPAA PVSGAFPTDG VYAAQPGAAA GARSANGQAA VDIGWREFFV DPRLQRLIEI ALKNNRDLRV SVLNVEASRA QYRITRAGLF PTLDGTGTGT IQRTPAGVSV TGQPLISRTY NVGVSASWEL DLFGRVQSLK DQALAQYFAT AQARKAAEIS LVASVADQYL TLLSTDDLLQ ITENTLKTAR ASYDLTKLQF DNGTGSELDL RQAQTVVETA LANQQAQARA RAQAVNALVL LIGEPLPDDL PAGLPLNAQN LLTDIPAGLP SDLLTRRPDI MQAEETLRAA NANIGAARAA FFPKISLTGA FGTASPTLGG LFKAGTAAWS FAPSIALPIF EGGQNIANLD LAHVQKRIEI ANYEKAIQSA FREVSDGLAA RGTYDQQIAA LERNEHAQQR RYDLSDLRYK NGVDSYLSVL TAQTDLYSAQ QQLISARLAR WTNLVDLYRA LGGGWIERAG ETPRPADAPV DYGKAAAPAP ASASASAAPA AAASAPAAG
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