| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0219 |
|---|
| Symbol | |
|---|
| ID | 3847547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 250931 |
|---|
| End bp | 252223 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637839892 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_440777 |
|---|
| Protein GI | 83719245 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.562064 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCCA TTGCGGCTTC GACGAAAACG GCGGGACATG CGCTGAACCG GCGCGCGGTG
GCGGCGGCCG TGATCGGCAA CGCGCTCGAG TGGTACGACT TCACCGTCTT CAGTTTCATG
ACGGTCGTGA TCGCCCAATT GTTCTTTCCG ACCAGCAACG AATATTCGTC GCTGCTCCTC
ACGACCGCGA CGTTCGGCGT CGCGTTCTTC ATGCGGCCGA TCGGCGGCAT CGTGCTCGGC
CTCTATGCGG ATCGCGCGGG ACGCAAGGCG GCGTTGTCGC TCGTGATCCT GCTGATGACG
CTCGGCATCT TCCTGATCGC GGTCGCGCCG CCGTATGCGG CGATCGGCAT CGGCGGGCCG
CTTCTCATCG TGCTCGGCCG CCTGTTGCAG GGCTTCTCCG CGGGCGGCGA ATTCGGCAGC
GCGACGGCGC TGCTGATCGA GGCCGCGCCG TTCTCGCGGC GCGGCTACTA CGGCAGCTGG
CAGATGGCGA GCCAGGCGGC GGCGCTGCTG TTCGGCTCGC TCGTCGGCGC GGCGGTGACG
CGCGGCCTGT CGACCGAGGC ACTGCATGCG TGGGGCTGGC GCGTGCCGTT CCTGATCGGG
CTCGTGATCG GGCCGGTCGG CTTCTATGTG CGCCGCCATC TCGTCGATTC GGAAGCGTTC
CTGCAGGCGC GCGAGCGCGG CGAGCGCGTG ACGCTTCGCG AAGTGTTCGC GCGGCATGGG
CGTGCGGTGG TATGCGGGCT CGGCGCGGTG ATCGCGCTCA CCGTCACCGT CTACGTGCTG
ATCAGCTATC TGCCGACCTT CGCCGTCAAG CAACTGAAGC TGCCTTACGG GCAATCGTTC
TACGCGGTGA TCATCGGCAA CCTGCTGCTG ACCGCGCTGT CGCCCGTCGC GGGCGCATGG
TCCGACCGGA TCGGGCGCAA GGGGCTCTCG CTGTGGGCGC TCGGGTTCAC GCTCGCGTTG
ATCTATCCGC TGTTCGAGTG GCTCGACGCG TCGCCGAGCA TTGCGCGGCT GATCGTCGTG
CAGGCGGTGC TGTCGGTGAC GCTCGCCGGC TACTACGGGC CGTTCGGCGC GATGATCGCC
GAGCTCTTTC CGGCGAACGT GCGCTCGACG GGGCTGTCGC TCGCGTATAA CGTCGCGGTG
ATGGTGTTCG GCGGCTTCGG CCAGTTCATC GTCACGTGGC TCATCAAGAC CACGGGCACG
CCGCTTGCGC CGACCTATTA CGTGATGGCG GGGCTCGCGC TGTCGCTCGT CGCGCTCGCG
TTCGTGCCGG CGAGAAGCGG CGATCTCGAT TGA
|
|---|
| Protein sequence | MASIAASTKT AGHALNRRAV AAAVIGNALE WYDFTVFSFM TVVIAQLFFP TSNEYSSLLL
TTATFGVAFF MRPIGGIVLG LYADRAGRKA ALSLVILLMT LGIFLIAVAP PYAAIGIGGP
LLIVLGRLLQ GFSAGGEFGS ATALLIEAAP FSRRGYYGSW QMASQAAALL FGSLVGAAVT
RGLSTEALHA WGWRVPFLIG LVIGPVGFYV RRHLVDSEAF LQARERGERV TLREVFARHG
RAVVCGLGAV IALTVTVYVL ISYLPTFAVK QLKLPYGQSF YAVIIGNLLL TALSPVAGAW
SDRIGRKGLS LWALGFTLAL IYPLFEWLDA SPSIARLIVV QAVLSVTLAG YYGPFGAMIA
ELFPANVRST GLSLAYNVAV MVFGGFGQFI VTWLIKTTGT PLAPTYYVMA GLALSLVALA
FVPARSGDLD
|
|---|
| |