| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0189 |
|---|
| Symbol | |
|---|
| ID | 3849935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | + |
|---|
| Start bp | 219483 |
|---|
| End bp | 220856 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637839862 |
|---|
| Product | glucarate dehydratase |
|---|
| Protein accession | YP_440747 |
|---|
| Protein GI | 83719461 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCTT TGATGGAGAC ACTTGTAATG CGAACCGAAT TGAGCCGTAC GACGACGCCC
GTCGTGTCCG ACCTGCGCGT CGTGCCCGTG GCCGGACGCG ACAGCATGCT GCTGAACCTG
AGCGGCGCGC ACGGGCCCTT CTTCACGCGC AACATCGTGC TGATCCGCGA CAGCGCGGGC
AATACCGGCG TCGGCGAAGT GCCGGGCGGC GAAGGCATCC GGCGCACGCT CGAGGATGCG
CGCGCGCTCG TCGTCGGCCA GCCGCTCGGC CGCTGGCAGG ATGTGCTGAA CGCGGTGCGC
GCCCGCTTCG CCGATCGCGA TGCGGGCGGC CGCGGCTTGC AGACCTTCGA CCTGCGCATC
ACGATTCACG CGGTGACGGC GCTCGAGGCG GCGCTGCTCG ACCTGCTCGG CCAGCACCTC
GGCGTGCCCG TCGCCGCGCT GCTCGGCGAA GGCCAGCAGC GCAGCCGCGT GCCGATGCTC
GGCTATCTGT TCTACATCGG CGATCGCAAG CGCACCGATC TCGACTACCG CAGCGAGCCG
CAGGCCGACG ACGCGTGGTT CCGTCTGCGC AACGAAGTGG CGCTCACGCC CGATGCGATC
GTGCGCCTTG CCGAGGCCGC GCACGCGCGC TACGGATTTC AGGATTTCAA GCTGAAGGGC
GGCGTGCTGT CGGGCGATGA CGAAATCGCC GCGGTGACCG CGCTCGCGAA GCGCTTCCCG
AACGCGCGGA TCACGCTCGA TCCGAACGGC GCATGGTCGC TGCAGGAGGC GATTCGCCTC
TGCCGCGGCA AGGGCGACGT GCTCGCGTAC GCGGAAGATC CGTGCGGCGC GGAGAACGGC
TACTCGGGCC GCGAGATCAT GGCCGAGTTT CGCCGCGCGA CGGGCCTGCC GACGGCGACC
AACATGATCG CGACCGACTG GCGCCAGCTC GGCCACGCGC TCCGGCTCGG CTCGGTCGAC
ATTCCGCTCG CCGATCCGCA TTTCTGGACG ATGCGCGGCT CGGTGCGCGT CGCGCAACTG
TGCGACGAAT GGGGGCTCAC GTGGGGCTCG CATTCGAACA ATCACTTCGA CATTTCGCTC
GCGATGTTCA CGCACGTCGC GGCCGCCGCG CCCGGCAACA TCACCGCGAT CGACACGCAC
TGGATCTGGC AGGACGGCCA GCGCCTGACG CGCGAGCCGC TGCGCATCGA GGACGGCCAC
GTCGCGGTGC CGCAGCGTGG CGGGCTCGGC GTCGAGATCG ACGAGGACGC GCTCGCCGGC
GCACACGAGC TGTATCTGGA GCACGGCCTC GGCAGCCGCG ACGATGCGGT CGCGATGCGG
TACCTGGTGC CGGACTGGAC GTTCGACAAC AAGCGCCCCT GTCTCGTGCG CTGA
|
|---|
| Protein sequence | MNALMETLVM RTELSRTTTP VVSDLRVVPV AGRDSMLLNL SGAHGPFFTR NIVLIRDSAG
NTGVGEVPGG EGIRRTLEDA RALVVGQPLG RWQDVLNAVR ARFADRDAGG RGLQTFDLRI
TIHAVTALEA ALLDLLGQHL GVPVAALLGE GQQRSRVPML GYLFYIGDRK RTDLDYRSEP
QADDAWFRLR NEVALTPDAI VRLAEAAHAR YGFQDFKLKG GVLSGDDEIA AVTALAKRFP
NARITLDPNG AWSLQEAIRL CRGKGDVLAY AEDPCGAENG YSGREIMAEF RRATGLPTAT
NMIATDWRQL GHALRLGSVD IPLADPHFWT MRGSVRVAQL CDEWGLTWGS HSNNHFDISL
AMFTHVAAAA PGNITAIDTH WIWQDGQRLT REPLRIEDGH VAVPQRGGLG VEIDEDALAG
AHELYLEHGL GSRDDAVAMR YLVPDWTFDN KRPCLVR
|
|---|
| |