Gene BTH_I0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0172 
SymboldapF 
ID3846850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp202772 
End bp203641 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID637839845 
Productdiaminopimelate epimerase 
Protein accessionYP_440730 
Protein GI83719190 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0253] Diaminopimelate epimerase 
TIGRFAM ID[TIGR00652] diaminopimelate epimerase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTCT CGTTTACCAA GATGCACGGC GCGGGCAACG ACTTCGTCGT GCTCGACGGC 
TACAGCCGCG CGCTGCCCCC GCTCACCGAC GCGCTGGTGC GCGCGCTCGC CGACCGCCAC
TTCGGGATCG GCGCCGATCA GTTGCTGCTC GTCGAAAAGC CGACCGTCGA CGGCGCCGAC
TTCAAGTACC GGATCTTCAA CTGCGACGGC GGCGAGGTCG AGCACTGCGG CAACGGCGCG
CGCTGCTTCG TCAAGTTCGT CCGCGACCAC GGGCTCACCG ACAAGGCGAG CGTGCGCGTC
GAAGTGAAGC ACGGCGTGAT CACGCTGACG ATGCAGGACA ACGGCGAGGT CGTCGTCGAC
ATGGGCGCGC CCGTGTTCGA GCCGGCGCGC GTGCCGTTCG ACACGAGCGG CCTCGACGGC
CGCCGCGAGG GCGCCGACAC GCTGTGGCCG CTGCCCGTGA ACGGCGCGAC GCGCTGGATC
TCGGTCGTGT CGATGGGCAA TCCGCACGCG GTGCAGATCG TCGACGACGC CGAGGCGTTC
CCGGTGCTCG CCGACGGGCC GGCGATCGAG CGCGACCCGC GGTTTCCGCA GCGCGTGAAC
GCGGGCTTCA TGCAGATCGT GTCGCGGCAC GAGGTGAAGC TGCGCGTGTA CGAGCGCGGC
GCGGGCGAGA CGCTCGCGTG CGGCACGGGC GCGTGCGCGG CCGTCGCGGC GGGCATCCGG
CGCGGGCAAC TCGATTCGCC CGTCACCGTC CACACGCACG GCGGCACGCT GACGATCTCG
TGGGACGGCG CGCGCGACGA ACGCGCGCCG CTCATGATGG CCGGCCCCGC GACGACCGTC
TTCGAAGGCG TGATCGACCT GCCCGCCTGA
 
Protein sequence
MKLSFTKMHG AGNDFVVLDG YSRALPPLTD ALVRALADRH FGIGADQLLL VEKPTVDGAD 
FKYRIFNCDG GEVEHCGNGA RCFVKFVRDH GLTDKASVRV EVKHGVITLT MQDNGEVVVD
MGAPVFEPAR VPFDTSGLDG RREGADTLWP LPVNGATRWI SVVSMGNPHA VQIVDDAEAF
PVLADGPAIE RDPRFPQRVN AGFMQIVSRH EVKLRVYERG AGETLACGTG ACAAVAAGIR
RGQLDSPVTV HTHGGTLTIS WDGARDERAP LMMAGPATTV FEGVIDLPA