Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0172 |
Symbol | dapF |
ID | 3846850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 202772 |
End bp | 203641 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637839845 |
Product | diaminopimelate epimerase |
Protein accession | YP_440730 |
Protein GI | 83719190 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCT CGTTTACCAA GATGCACGGC GCGGGCAACG ACTTCGTCGT GCTCGACGGC TACAGCCGCG CGCTGCCCCC GCTCACCGAC GCGCTGGTGC GCGCGCTCGC CGACCGCCAC TTCGGGATCG GCGCCGATCA GTTGCTGCTC GTCGAAAAGC CGACCGTCGA CGGCGCCGAC TTCAAGTACC GGATCTTCAA CTGCGACGGC GGCGAGGTCG AGCACTGCGG CAACGGCGCG CGCTGCTTCG TCAAGTTCGT CCGCGACCAC GGGCTCACCG ACAAGGCGAG CGTGCGCGTC GAAGTGAAGC ACGGCGTGAT CACGCTGACG ATGCAGGACA ACGGCGAGGT CGTCGTCGAC ATGGGCGCGC CCGTGTTCGA GCCGGCGCGC GTGCCGTTCG ACACGAGCGG CCTCGACGGC CGCCGCGAGG GCGCCGACAC GCTGTGGCCG CTGCCCGTGA ACGGCGCGAC GCGCTGGATC TCGGTCGTGT CGATGGGCAA TCCGCACGCG GTGCAGATCG TCGACGACGC CGAGGCGTTC CCGGTGCTCG CCGACGGGCC GGCGATCGAG CGCGACCCGC GGTTTCCGCA GCGCGTGAAC GCGGGCTTCA TGCAGATCGT GTCGCGGCAC GAGGTGAAGC TGCGCGTGTA CGAGCGCGGC GCGGGCGAGA CGCTCGCGTG CGGCACGGGC GCGTGCGCGG CCGTCGCGGC GGGCATCCGG CGCGGGCAAC TCGATTCGCC CGTCACCGTC CACACGCACG GCGGCACGCT GACGATCTCG TGGGACGGCG CGCGCGACGA ACGCGCGCCG CTCATGATGG CCGGCCCCGC GACGACCGTC TTCGAAGGCG TGATCGACCT GCCCGCCTGA
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Protein sequence | MKLSFTKMHG AGNDFVVLDG YSRALPPLTD ALVRALADRH FGIGADQLLL VEKPTVDGAD FKYRIFNCDG GEVEHCGNGA RCFVKFVRDH GLTDKASVRV EVKHGVITLT MQDNGEVVVD MGAPVFEPAR VPFDTSGLDG RREGADTLWP LPVNGATRWI SVVSMGNPHA VQIVDDAEAF PVLADGPAIE RDPRFPQRVN AGFMQIVSRH EVKLRVYERG AGETLACGTG ACAAVAAGIR RGQLDSPVTV HTHGGTLTIS WDGARDERAP LMMAGPATTV FEGVIDLPA
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