| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0164 |
|---|
| Symbol | hslU |
|---|
| ID | 3849017 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 195371 |
|---|
| End bp | 196714 |
|---|
| Gene Length | 1344 bp |
|---|
| Protein Length | 447 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637839837 |
|---|
| Product | ATP-dependent protease ATP-binding subunit HslU |
|---|
| Protein accession | YP_440722 |
|---|
| Protein GI | 83721034 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.121323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACCA TGACCCCTGC CGAGATCGTC TCGGAACTCG ACAAGCACAT CATCGGCCAG
GACAAGGCGA AGAAGGCCGT CGCGGTCGCG CTGCGCAACC GCTGGCGCCG CCAGCAGGTC
GCCGAGCCGC TGCGCCAGGA GATCACGCCG AAGAACATCC TGATGATCGG GCCGACGGGC
GTCGGCAAGA CCGAGATCGC GCGGCGCCTC GCGAAGCTCG CCGATGCGCC GTTCATCAAG
ATCGAGGCGA CGAAGTTCAC CGAGGTCGGC TACGTCGGCC GCGACGTCGA CAGCATCGTG
CGCGACCTGA TCGAAATCTC CGTCAAGCAG ACTCGCGAGA CGGAAATGCG CAAGGTGCGC
AGCAAGGCGA CCGATCTCGC CGAAGACCGC ATCCTCGACG TGCTGCTGCC GCAGCCGCGC
GCGGTCGGCT TCGGCGCGAG CGTCGAGCAT GCGAACGACG ACAACAACGC GACGCGCCAG
ACGTTTCGCA AACGCCTGCG CGAAGGCCAG CTCGACGACA AGGAAATCGA GCTCGACATC
GAGCAGCCGA CGGTCGGCAT GGACATCATG GCGCCGCCGG GCATGGAAGA GATGACCGAG
CAGATCCGCT CGATGTTCTC GAACCTGGGC AGCGGCAAGA AGCAGCGCCG CAAGGTGAAG
ATCAAGGAGG CGCTGAAGCT GCTGACCGAC GAGGAAGCGG CGAAGATGCT CAACGACGAG
GAAGTGAAGA CGAAGGCCGT GCAGAACGTC GAGCAGAACG GCATCGTGTT CCTCGACGAG
ATCGACAAGA TCACGTCGCG CAACCACGAA GGCGGCGGCG GCGAGGTGTC GAGGCAGGGC
GTGCAGCGCG ATCTGCTGCC GCTCGTCGAA GGCACGACGA TCAACACGAA GTACGGGATG
GTGAAGACCG ATCACATCCT GTTCATCGCG AGCGGCGCAT TCCATCTCGC GAAGCCGAGC
GACCTGATTC CGGAGCTGCA GGGGCGCTTT CCGATCCGCG TCGAGCTCGA TTCGCTGTCG
GTGAAGGATT TCGAAGCGAT CCTCGTCGCG ACCGACGCGA GCCTCGTCAA ACAGTATCAG
GCGCTCCTCG CGACCGAGGA CGTCGCGCTC GAATTCGCCG ACGACGGCAT TCGCCGGCTC
GCCGAGATCG CCTATGCGGT CAACGAGAAG ACCGAGAACA TCGGCGCGCG GCGCCTGTAT
ACGGTGATCG AGAAGCTGCT CGAGGAAGTG TCGTTCGCGG CGGGCAATCA TGCCGGCCAA
AGCGTGACGA TCGATGCGGC TTACGTCGAC CGCGCGCTCG GCGAGGTGTC GAAGGACGAG
GATCTGTCGC GCTACGTGCT GTGA
|
|---|
| Protein sequence | MSTMTPAEIV SELDKHIIGQ DKAKKAVAVA LRNRWRRQQV AEPLRQEITP KNILMIGPTG
VGKTEIARRL AKLADAPFIK IEATKFTEVG YVGRDVDSIV RDLIEISVKQ TRETEMRKVR
SKATDLAEDR ILDVLLPQPR AVGFGASVEH ANDDNNATRQ TFRKRLREGQ LDDKEIELDI
EQPTVGMDIM APPGMEEMTE QIRSMFSNLG SGKKQRRKVK IKEALKLLTD EEAAKMLNDE
EVKTKAVQNV EQNGIVFLDE IDKITSRNHE GGGGEVSRQG VQRDLLPLVE GTTINTKYGM
VKTDHILFIA SGAFHLAKPS DLIPELQGRF PIRVELDSLS VKDFEAILVA TDASLVKQYQ
ALLATEDVAL EFADDGIRRL AEIAYAVNEK TENIGARRLY TVIEKLLEEV SFAAGNHAGQ
SVTIDAAYVD RALGEVSKDE DLSRYVL
|
|---|
| |