| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0096 |
|---|
| Symbol | |
|---|
| ID | 3849225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007651 |
|---|
| Strand | - |
|---|
| Start bp | 102222 |
|---|
| End bp | 104012 |
|---|
| Gene Length | 1791 bp |
|---|
| Protein Length | 596 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637839769 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_440656 |
|---|
| Protein GI | 83721360 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000382235 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGAAC AACGGTACGC GCCGCATCAC ATCGCAGACC TCATCACAGT GCGCAATGTC
GTCACACAGA TGAAGGAAAT GGCGGCAATG AGCCGTTATC GCCCACCCTT CACGCTCGTA
CAACGGCCTG TGCCCCGTAT TCAGTTAGGA GCTCACGCTA GCCCCATCCT TGCACTGCTA
GGACTGCGTG AACCGGCCAG ACAGATCAAG GCCCGCGCCG GTGAGGTGCA TGAATTTCAC
CCGTATTTCG AAGCGTTTCT CGAAGTGGCC GAAATTGGGC TGCGCTATGA AGACGCGACC
GGTGAAATGC GTACACTCGA ATACGATGAA TTCGACGGGG CAAGTTTCAG CAATCACCCC
AAAGTGGCAC TGTACTGCGC TACCTTGAAC GATTTTTTTG TCCGGCTTGG AAAACGACTA
GACAAAAAAT CCCGGGCGGC CGCCAAGGCA TTTGAGCGCA CGCCTTCGGA CAACCGCCAG
CACGCAATGC GGTACGCGGC CCAGCTAATT GACCGCGCAC CTAGAACGCG CATCGTTCAC
GTCACAATCC GTCGGCATCT CGATCTCTAC GGCAACCCAG TGTCGCAGGA TGAAATACGC
GCATGCCGGC AAATGCTGAG CGATTATCTG GACGAGCCAA GCCCCAAACG CTCGCATCTC
GGTCACTGCT CTTTTCTCAG AAGGTTTTCA GACGTCGGCT ATTGCCTCGA TGCTTTTGTT
TTCCTGAGTG ATTCATTTCT CAAGCCCGCG GCAGACATTG CGCGAGATCT GACGGAATGG
TGGGAAGCGT TCGCGCCAAA ATCCACAGCC TGTGTGACCC GCGTATTGCC CCCCGACAAG
CTTGTAAAGG AGACGCTGGA CAGGATGACG CTCGTGACAG AACCGGATTT CTACGTCCGC
CCAGCCCGTC TCAGTGGTGC GCCGAAAAAG CTCCGTCACT TCTGGTGCAC CCAGTTCCCG
GTGAACCTGC GCGCGGCGCG CCGCAGAGGC AAAGCCGGTT CGTACCGGCC GACCGCAGAC
CAGTCCCACA CCGTAGATCC GCTGCTTGAA GCGCTCCGGG AGGAAGAAAT AGAAGATAAC
GGCGTTCAGA AGGAGCTGCG CTGGCGCCAG GCGCGGGAGA AAGAGCAGGC ACGACGTTCC
GCGAGCCACA AGAAGGGAGC TCGCACGCGC GCGAAGAACC GGAAGACAGC GGAGCAGGAG
CGCGCCTGGC AAAGCGCTCG TTTTGAGGCG TGCAAGAGCC GCATCATGTA CGACGATGAG
ATCATCGATG TAGAGGCGGC CGAGGTAATT GACGTCGCTC AGGCGTTGCG CCGACATTCA
CGCCGACGCA CGGTCCTCCC GTCAGCTAGC GCAACGCCGC GCCACGCCGA CAACCTGGCG
CCCTGTTCGC CGGCGGCAGG CATCACGCCC AACGCACCGG AAATGGCTGC GGCGAGCTCG
GATCGGGGAG TTGCAGCAGG GTCGCTTACC GAACCGCGCA TTTTCGACGA ACAGCCTGGT
GTAATCACCC CTGCACCCGG TCTCGGCGAG ACTGAAGGCG CGACAGCCGC AACGTCCGGG
CCCGCAACCA ATGCCGGACC AAAGACTCGC CGCAGGACTT CGGAAAAACA GGAGCGCGAC
AAGCACGGGA GACTCCGGAC CATACAGGTT GAGGTCCGGA GGGCATCGCC CCTTACCAGG
AGCAGTACGG CGATGAAAAA GGCGCCGAAC AATGCCGAAG CGAACACGCC CAGCACAGAG
AGCGGTTTCG ACGCATCCAG CCCGCACACG ACTTCAGACC CGACGGAGTA G
|
|---|
| Protein sequence | MAEQRYAPHH IADLITVRNV VTQMKEMAAM SRYRPPFTLV QRPVPRIQLG AHASPILALL
GLREPARQIK ARAGEVHEFH PYFEAFLEVA EIGLRYEDAT GEMRTLEYDE FDGASFSNHP
KVALYCATLN DFFVRLGKRL DKKSRAAAKA FERTPSDNRQ HAMRYAAQLI DRAPRTRIVH
VTIRRHLDLY GNPVSQDEIR ACRQMLSDYL DEPSPKRSHL GHCSFLRRFS DVGYCLDAFV
FLSDSFLKPA ADIARDLTEW WEAFAPKSTA CVTRVLPPDK LVKETLDRMT LVTEPDFYVR
PARLSGAPKK LRHFWCTQFP VNLRAARRRG KAGSYRPTAD QSHTVDPLLE ALREEEIEDN
GVQKELRWRQ AREKEQARRS ASHKKGARTR AKNRKTAEQE RAWQSARFEA CKSRIMYDDE
IIDVEAAEVI DVAQALRRHS RRRTVLPSAS ATPRHADNLA PCSPAAGITP NAPEMAAASS
DRGVAAGSLT EPRIFDEQPG VITPAPGLGE TEGATAATSG PATNAGPKTR RRTSEKQERD
KHGRLRTIQV EVRRASPLTR SSTAMKKAPN NAEANTPSTE SGFDASSPHT TSDPTE
|
|---|
| |