Gene BTH_I0090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0090 
Symbol 
ID3846887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp96449 
End bp97024 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content65% 
IMG OID637839763 
Producthypothetical protein 
Protein accessionYP_440650 
Protein GI83719130 
COG category[N] Cell motility
[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3678] P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00936668 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATCG AACGATACTC GAAGGGGCTG ACAGTCATTT CGCTGACGGC CGCACTCTGG 
TCGCTCGGCA TGCCGTCCGC ACCGGCCGCG CCGGCGTCCG CGCCCGACGC GTCGGCGCAG
ACGCCGTGCG GCCGCGGCTA CGGCTACGGA ATGGGCCCGG GCATGATGGG CGGCGGCTAC
AGGCGCGGGA TGATGGGCGG CTACGGGATG GGGCCCGGCA TGATGCGCGG CTATGGCCCG
GGCATGATGA TGGGCTTCGG CGGCTGGCCA GGCGACCTTG ATCTGACGAC CGAGCAGCGC
GCGAAGATCA ATCGGATTCA GGACGAGACG CGCAAGACGC ACTGGGCGCT GATGGGCAAC
ATGATGGATC AGCAGGCGAA GCTGCGCGAT CTGTACGACG CGCCGAAGCA CGATAGCGCG
GCGATCGACG AAACATCGAA GGCGATCGGC TCGCTGCGGC AGAAGATGAT CGATTCCTCG
GTGGACGCGC ACAAGAAGAT GGAAGCGGTG CTGACGAGCA AGCAGTTGGA CAAGCTGCGC
GCGTACGAGA AGCAAGCGAA CGACATGGGC TGGTAG
 
Protein sequence
MKIERYSKGL TVISLTAALW SLGMPSAPAA PASAPDASAQ TPCGRGYGYG MGPGMMGGGY 
RRGMMGGYGM GPGMMRGYGP GMMMGFGGWP GDLDLTTEQR AKINRIQDET RKTHWALMGN
MMDQQAKLRD LYDAPKHDSA AIDETSKAIG SLRQKMIDSS VDAHKKMEAV LTSKQLDKLR
AYEKQANDMG W