Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_I0071 |
Symbol | |
ID | 3847280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007651 |
Strand | - |
Start bp | 75778 |
End bp | 76293 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637839744 |
Product | ECF subfamily RNA polymerase sigma factor |
Protein accession | YP_440631 |
Protein GI | 83718744 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCTCCG CCGATCTCGA CGACCCACTA CGCGAGTTGC TGCCGCGACT GCGCCGCTTC GCGCTCTGGC TAACCCGCGA CGTGCACAGC GCCGACGATC TCGTGCAGTC GACGCTCGAG CGCGCGCTGT CGCGCTGGTC GACGCGCCGT GACGCTTCGG CGCTGCGCAG CTGGCTCTTC ACGATCCTGT ACCGGCAGTT CGTCGATACG ACGCGGCGGG CCAAGCGCTA CGCGTGGCTG CTCGGCCGGA TCAAGGACGA CGACGAGCCG CAATGGCCGT CCGCCGAGGA TCACGCGCTC GCGCGATCGA TGCTCGACGC GTTCGGCCGG CTGTCGACGG AACAGCGCAG CCTGCTGCTG CTCGTCGCCG TCGAGGGGTT CAGCTATCAG GAAGTCGCCG AGCTGCTCGA CATCCCGATC GGCACCGTGA TGTCGCGGCT GTCGCGCGCG CGTCAGGCGC TGCGCGCGCT CGGCGACGGC GAGATTTCCG CTCCTTCGCT GCGTTTGATG AAATGA
|
Protein sequence | MPSADLDDPL RELLPRLRRF ALWLTRDVHS ADDLVQSTLE RALSRWSTRR DASALRSWLF TILYRQFVDT TRRAKRYAWL LGRIKDDDEP QWPSAEDHAL ARSMLDAFGR LSTEQRSLLL LVAVEGFSYQ EVAELLDIPI GTVMSRLSRA RQALRALGDG EISAPSLRLM K
|
| |