| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0054 |
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| Symbol | |
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| ID | 3847468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 57884 |
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| End bp | 59554 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637839727 |
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| Product | GMC oxidoreductase |
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| Protein accession | YP_440614 |
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| Protein GI | 83718932 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.810146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGCGG CAACCCCCAA AGGCTCGACG GAATTCGACT ACATCGTGAT CGGCGGCGGC
TCGGCCGGCT GCGTCGCCAC GCACCGGCTC GTCAATGCCG GGCATCGCGT GCTGCTGCTC
GAAGCCGGCC CGCCCGACAA TTCGTTCTTC GTCCACACGC CCGCGACGTT CGTGCGCGTG
ATCGGCACGA AGCGGACCTG GGTCTACGAG ACGGAGCCGC AGGCGCACGC GGCCGGCCGG
CGCATGTACG TGCCGCAGGG CCGCACGCTC GGCGGCGGCA GTTCGGTGAA CGCGATGGTC
TACATCCGCG GCACGCCCGC CGATTACGAC GGCTGGCGCG ACGCCGGCTG CGACGGCTGG
GGCTGGGACG ACGTGCTGCC GTTTTTCCGG CGCGCCGAGC GCAACCACCG GCTCGCGGGG
CCGCTGCACG GCGCCGACGG GCCGCTGCAC GTGAGCGACG CGCGCTTTCG TCATCCGCTG
AGCGACGCGT TCGTGCAGGG CGCGCAGGAG TTCGGGCTGC CGTACAACGA CGACTTCAAC
GGCGCGTCGC AGGCGGGCGT CGGCTTCTAT CAGACGACGA CGTTCGAAGG CCGGCGCGGC
AGCACCGCCG CGACGTATCT CGCCGCCGTC AAGCGCGATC CGCTGCTGAC GATCGAGACC
GACGCGTTCG TCACGCGCAT CGTGTTCGAG AACGGCGCGG CGGTCGGCGT GCGCTACCGT
GCGCGCGGCG GCGAGGAGCG GCTCGTGCGC GCACGCGCGG AGATCGTGCT TTGCGCGGGC
GCGCTCGCGA GCCCGAAGCT CCTGATGCTG TCGGGCATCG GCCCGGCGGA TCAGCTCCGG
CAGCACGGCA TCGCGGTCGT GCACGATTCG CCCGAGGTCG GACTCAACTT CCAGGACCAT
CTCGAAGTGT CGCTGTATGG CCGCGCGCGC GCGCCGATCA GCCTCGCGGG CCAGGACCGC
GGGCTCAACG CGCTGCGCCA CGGCATCCAG TACACGCTGT TCCACACGGG GCTCCTCACG
TCGAACGTCG TCGAGAGCGG CGGCTTCGTC GATACCGCGA ACGGCGGCCG CCCCGACGTG
CAGTTCCACG TGCTGCCCGT GCTCGTCGGC GACGTCGGCC GCGAGCCGCT CGAAGGGCAC
GGGATCTCGA TCAACCCGTG CTTCCTGCGG CCGAAGTCGC GCGGCACGGT GCGCCTGCGC
AACGCCGATC CGCTCGCGCC GATTCTGTTC GACGGCAATT TCCTCAGTCA TCCGGACGAT
TTCGCGACGC TCGTGCGCGG GCTTTCGCTC GCGCGCGAGA TCATGCGCAT GCCGTCGATG
TCGAAGGCGA TCGCGGGCGA GATGCTGCCG ACCGACGGCG GCCGCGTCGA TCTCGACGCA
TACGTGCGCT CGCACGCGAA GACCGTCTAT CACCCGTCGG GCACGTGCCG GATGGGCGGC
GATCCGGGCT CGGTCGTCGA TTCGCAGCTG CGCGTGCGCG GCGTCGGCGG GCTGAGGATC
TGCGATGCGT CGGTGATGCC GTCGCTCGTG TCCGGCAACA CGAATGCGCC GACGATCATG
ATCGCCGAGC GCTGCGCCGA ATTCATGCTG TCGCCCGCGC TCGCGCCGAA CGCGCGCGCC
GGCGCGAGCG CGCCGCGGGC CGCACCGCTG GACGCGGGCC ATGCGCGCTG A
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| Protein sequence | MSAATPKGST EFDYIVIGGG SAGCVATHRL VNAGHRVLLL EAGPPDNSFF VHTPATFVRV
IGTKRTWVYE TEPQAHAAGR RMYVPQGRTL GGGSSVNAMV YIRGTPADYD GWRDAGCDGW
GWDDVLPFFR RAERNHRLAG PLHGADGPLH VSDARFRHPL SDAFVQGAQE FGLPYNDDFN
GASQAGVGFY QTTTFEGRRG STAATYLAAV KRDPLLTIET DAFVTRIVFE NGAAVGVRYR
ARGGEERLVR ARAEIVLCAG ALASPKLLML SGIGPADQLR QHGIAVVHDS PEVGLNFQDH
LEVSLYGRAR APISLAGQDR GLNALRHGIQ YTLFHTGLLT SNVVESGGFV DTANGGRPDV
QFHVLPVLVG DVGREPLEGH GISINPCFLR PKSRGTVRLR NADPLAPILF DGNFLSHPDD
FATLVRGLSL AREIMRMPSM SKAIAGEMLP TDGGRVDLDA YVRSHAKTVY HPSGTCRMGG
DPGSVVDSQL RVRGVGGLRI CDASVMPSLV SGNTNAPTIM IAERCAEFML SPALAPNARA
GASAPRAAPL DAGHAR
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