Gene BTH_I0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_I0042 
Symbol 
ID3848251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007651 
Strand
Start bp43366 
End bp46395 
Gene Length3030 bp 
Protein Length1009 aa 
Translation table11 
GC content67% 
IMG OID637839715 
Producttype III restriction-modification system, res subunit 
Protein accessionYP_440602 
Protein GI83721135 
COG category[V] Defense mechanisms 
COG ID[COG3587] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTGC ATTTCGAGTC GGATCTCGAC TATCAGCTCG AAGCGATCGA GGCGGTATGC 
GGTCTGTTTC GCGGCCAGGA GGCGTGCCGC GCCGAATTCA GCGTGACCGC GCAGGCCGCG
CGGCGGCGCG CGAGCCCGCA GATTTCGCTC GGGATGGCCG AATCGGGGCT CGGCGTCGGC
AATCGCCTGA CGCTCGACGC GCACACGTTC GCCGAGAATC TCGCGCGCGT GCAGGTGCGC
AACGGGCTGC CGCCGTCCGG CGCGCCGCGC TCGAACGATT TCACCGTCGA GATGGAAACG
GGCACGGGCA AGACTTACGT ATACCTGCGC ACGATCTTCG AGCTGCACCG CCGCTTCGAC
TTCACGAAGT TCGTGATCGT CGTGCCGTCG GTCGCGATCA AGGAAGGCGT GTACAAGACG
CTGCAGATCA CCGAGCGGCA TTTCCGGCGC CTGTACGCGG GCGTGCCGTT CGACTATTTC
GTCTACGATT CGGCGAAGCT CGGCGAGGTG CGCAGCTTCG CGTCGAAATC GACCGTGCAG
ATCATGATCG TCACGGTCGC GGCGATCAAC AAGAAGGACG TCAACACGCT CTACAAGGAC
AGCGAACAGA CGGGCGGCGA AAAGCCGATC GACCTGATTC GCGCGGCGCA TCCGATCGTG
ATCGTCGACG AGCCGCAGAG CGTGGACGGC GGGCTCGACG GGCGCGGCAA GGAAGCGCTC
GACGCGATGC ACCCGCTCTG CACGCTGCGC TATTCGGCGA CGCACGCGGA CAAGTATCAG
ATGCTGTACC GGCTCGACGC GATCGACGCG TACGAGCGCA AGCTCGTCAA GCAGGTCGAG
ATCGCGTCGG CGACGGTCGA GGATGCGCAC AACAAGCCGT TCATGCGCGT GATGTCGATC
GGCAGCCGGC GCGGGGCGAT CGCCGCGCGC GTCGAGCTCG ACGTCGCGAC GGCCGCGGGC
GACGTCGAGC GGCAGACGGT TTCCGTCTCC GACGGCGACG ATCTCGAGCG CATCGCGCGC
CGCGCCGTCT ACGCGAACTT CAGGATCGGC GAGATTCACG CGGCGCGCGG CGCCGAGTAT
CTGGTGCTGC GCTATCCGGG CGGCGATGCG TTCCTGTCGA TCGGCGACAC ATATGGCGAC
GTCGATACGC TCGCGATCCA GCGCGAGATG ATCCGCCGCA CGATCCGCGA GCATCTCGAC
AAGGAACTGC GGCTCACGCC GCTCGGCGTG AAGGTGCTGT CGCTCTTCTT CGTCGATGCG
GTCGACAAGT ATCGCAAGTA CGACCGCCAC GGCCAGCCGT TCAAGGGCGA TTACGCGCGG
CTGTTCGAAG AAGAATACCG GCGCGCGGCG AAGCTGCCGG AATATCGCGC GCTGTTTGCC
GGCGTCGATT GCGCGATCGC GGCCGAGGCC GTGCACGACG GCTATTTCTC GATCGACAGG
AAAGGCGGCT GGACCGACAC GAGCGACAAG AGCGCGGGCA GCCGAGAGAA CGCGGAGCGC
GCGTACGGCC TCATCATGAA GGACAAGGAG CGGCTGTTGT CGTTCGACAC GCCGCTCAAG
TTCATCTTCT CGCATTCGGC GCTGAAGGAA GGCTGGGACA ATCCGAACGT GTTCCAGATC
TGCACGCTGC GCGACATCCG CAGCGAGCGC GAGCGGCGCC AGACGATCGG CCGCGGGCTG
CGTCTCGCCG TCAACCAGCG CGGCGAGCGC GTGCGCGGCT TCGACGTCAA CACGCTGACG
GTGATCGCGG GCGAGAGCTA CGAGCAGTTC GCCGAGAACC TGCAGAAGGA AATCGAAGCC
GATACGGGCA TCCGCTTCGG CATCGTCGAA ACGCATCAGT TCGCCGCGCT GCCCGTGCCG
GCGGGCGACG GCAGCGTGCA GCCGCTCGGC GTCGAACGGT CCACCGCGCT ATGGACGTAT
CTGCGCGACG CCGGCTATCT CGATGCGCGC GGCCGCGTGC AGGACACGCT GCGCGCGGCG
CTCAAGCTGC GCGCGCTGCC GGTGCCCGAT GAATTCGGCT CGCAGCGCGC GCTGATCGTC
GACATGCTGC GCAAGCTCGC GGGGCGGCTC GACGTGCGCA ACGCGGACGA GCGCCGCCAC
ATCGCGCTGC GGCCCGACGC GCATGGCAAG GCGGTGTACC TGGGCGACGA ATTCCGCGCG
CTGTGGGAGC GCATCCAGTA CCGGACGACC TACCGCGTGA ACTTCGACAA CGCACGCCTG
ATCGAGCGCT GCGTCGCCGC GCTGAAGGCC GCGCCCGCCG TCGCGCGCGC GCGGCTGCAG
TGGCGCAAGG CCGAAATCGC GATCGACGCG GCGGGCGTCG AGGCGATCGA AACCGAGGCG
GCGGGCGCGA TCGCGATCGA CGAAGGCGAA ATCGACCTGC CGGATCTGCT GACCGAGCTG
CAGGACCGCA CGCAGCTCAC GCGGCGCACG ATCGCGACCG TGCTGATCGA AAGCGGCAGG
CTCGACGAGT TCCCGCGCAA TCCGCAGCGC TTCATCGCGC TCGTCGCTGC GGCGCTCGAG
CGCTGCAAGC GCGACGCGCT CGTCGACGGG ATCGAATACA AGTTGCTCGG CAAGGAGCAC
GTGCATGCGC TGTCGCTGTT CGAGGACGAG CCGCTTACCG GCTATCTGTC GAGCATGCGG
CGCGGCGCGG CGAAATCGAT CCATGAGGAC GTGCCGTGCG AAACGCCTGC CGAGCGCGTG
TTCGTCGAAT CGCTCGAACG GGACGACGCG GTCAGGCTGT ACGCGAAGCT GCCCGGCTGG
TTCAAGATCC CGACGCCGCT CGGCAGCTAC AGCCCCGACT GGGCGGTGCT GATCGCCGAG
GGCGACGGGC CGCGCCTCTA TTTCGTCGTC GAATCGAAGA GCGGCATCGC CGACAGCGAT
CTGCACGCTC ACGAGCGGCG CAGGATTCAG TGCGGCGCGG CGCATTTCCG CGCGCTCGAG
GCGGCCTCGG TCAATCCTGC GCGCTATGTG CGCGCGCGTT GCGCCGACGA TCTGCCGACG
GCCCCCGCCA ACGCGCGCGA CGCGGCCTGA
 
Protein sequence
MQLHFESDLD YQLEAIEAVC GLFRGQEACR AEFSVTAQAA RRRASPQISL GMAESGLGVG 
NRLTLDAHTF AENLARVQVR NGLPPSGAPR SNDFTVEMET GTGKTYVYLR TIFELHRRFD
FTKFVIVVPS VAIKEGVYKT LQITERHFRR LYAGVPFDYF VYDSAKLGEV RSFASKSTVQ
IMIVTVAAIN KKDVNTLYKD SEQTGGEKPI DLIRAAHPIV IVDEPQSVDG GLDGRGKEAL
DAMHPLCTLR YSATHADKYQ MLYRLDAIDA YERKLVKQVE IASATVEDAH NKPFMRVMSI
GSRRGAIAAR VELDVATAAG DVERQTVSVS DGDDLERIAR RAVYANFRIG EIHAARGAEY
LVLRYPGGDA FLSIGDTYGD VDTLAIQREM IRRTIREHLD KELRLTPLGV KVLSLFFVDA
VDKYRKYDRH GQPFKGDYAR LFEEEYRRAA KLPEYRALFA GVDCAIAAEA VHDGYFSIDR
KGGWTDTSDK SAGSRENAER AYGLIMKDKE RLLSFDTPLK FIFSHSALKE GWDNPNVFQI
CTLRDIRSER ERRQTIGRGL RLAVNQRGER VRGFDVNTLT VIAGESYEQF AENLQKEIEA
DTGIRFGIVE THQFAALPVP AGDGSVQPLG VERSTALWTY LRDAGYLDAR GRVQDTLRAA
LKLRALPVPD EFGSQRALIV DMLRKLAGRL DVRNADERRH IALRPDAHGK AVYLGDEFRA
LWERIQYRTT YRVNFDNARL IERCVAALKA APAVARARLQ WRKAEIAIDA AGVEAIETEA
AGAIAIDEGE IDLPDLLTEL QDRTQLTRRT IATVLIESGR LDEFPRNPQR FIALVAAALE
RCKRDALVDG IEYKLLGKEH VHALSLFEDE PLTGYLSSMR RGAAKSIHED VPCETPAERV
FVESLERDDA VRLYAKLPGW FKIPTPLGSY SPDWAVLIAE GDGPRLYFVV ESKSGIADSD
LHAHERRRIQ CGAAHFRALE AASVNPARYV RARCADDLPT APANARDAA