| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0032 |
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| Symbol | fliR |
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| ID | 3849457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | + |
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| Start bp | 31911 |
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| End bp | 32693 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637839705 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_440592 |
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| Protein GI | 83721282 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.413107 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCTCCG TCACCTACGC GCAACTGAAC GGATGGCTCA CGGCCTTCCT GTGGCCGTTC
GTGCGGATGC TCGCGCTCGT CGCGCTCGCG CCGGTGACAG GCCACCGCGC GACGCCCGTG
CGCGTGAAGA TCGGGCTCGC GGGCTTCATG GCGCTCGTCG TCGCGCCGAC GCTGCCGCCG
ATGCCCGCAG CCACCGTGTT CTCCGCGCAG GGCGTGTGGA TCATCGTCAA CCAGTTCCTG
ATCGGCGCGG CGCTCGGCTT CACGATGCAG ATCGTGTTCG CGGCGGTCGA GGCGGCGGGC
GACATCATCG GCCTGTCGAT GGGGCTCGGC TTCGCGACCT TCTTCGATCC GCATTCGAGC
GGCGCGACGC CCGTGATGGG GCGCTTCCTG AATGCGGTCG CGATCCTCGC GTTTCTCGCG
TTCGACGGGC ATCTGCAGGT GTTCGCCGTG CTCGTCGACT CGTTCAGGCT CGTGCCGATC
TCGGCCGACC TGCTGCGCGC GGCCGGCTGG CAGACGCTCG TGGCATTCGG CTCGGCGATT
TTCGAGATGG GGCTGTTGCT CGCGCTGCCC GTCGTCGCGG CGCTGCTGAT CGCGAACCTC
GCGCTCGGCA TCCTGAACCG CGCGGCGCCG CAGATCGGGA TCTTCCAGGT CGGCTTTCCG
GTGACGATGC TCGTCGGCCT GCTGCTCGTC CAGTTGATGG CGCCGAACCT GATTCCGTTC
GTCGGGCGGC TGTTCGATAC CGGCGTCGAT TTCGTCGGGC GCGTTGCGGC CGGCATGCGT
TGA
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| Protein sequence | MFSVTYAQLN GWLTAFLWPF VRMLALVALA PVTGHRATPV RVKIGLAGFM ALVVAPTLPP
MPAATVFSAQ GVWIIVNQFL IGAALGFTMQ IVFAAVEAAG DIIGLSMGLG FATFFDPHSS
GATPVMGRFL NAVAILAFLA FDGHLQVFAV LVDSFRLVPI SADLLRAAGW QTLVAFGSAI
FEMGLLLALP VVAALLIANL ALGILNRAAP QIGIFQVGFP VTMLVGLLLV QLMAPNLIPF
VGRLFDTGVD FVGRVAAGMR
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