| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0019 |
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| Symbol | |
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| ID | 3849727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 20337 |
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| End bp | 21956 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637839692 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_440579 |
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| Protein GI | 83719194 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.308598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCAAG TCCCACATCC GCGCGCGCGC CGCGCGCTGA GCGCCGCCGT CGCCGCAGCG
GCAGCCGTGC TGCTCGCCGG CTGCGCGGTC GGGCCCGACT ATCACCGCCC CGACGCGGCG
ATTCCCGCCG CATACAAGGA AGCGCCGCCC GGCTGGAAGG TCGCGCAGCC GGCGGACCGT
GCGGACCGCG GCCCGTGGTG GTCGATCTAT GACGATCCGC AACTGAACGC GCTCGTCGAC
AAGCTCAACG CGTCGAACCA GACCGTCGCG CAATATGCGG CCGCGTACCG GCAGGCGCGT
GCGCTCGTCG CCCAGGCGCG CGCGTCGTAC TTCCCGACGC TCGGGCTGAC CGCGAGCGAA
TCGCGCGCGT CGAGCGCGCT GTCGTCGGGC ACCACGACGC GCACGATCGG CAACACCTAC
AACGTCGGCC TGGATGCGTC GTGGGAGCCG GACCTGTGGG GCAAGGTGAG CCGCACGGTC
GGCGCGCAGA AGGCGGGGGA AGCGGCCGCG GCCGCCGATC TCGCGAACGC GCGGCTGTCC
GCGCAGGCAA CGCTCGCGCA GACCTATTTC CAATTGCGCG CCGCGGACGC GACGCAAAAA
CTCCTCGACG ACACCGTCGC GTCGTACCAG AAATCGCTGC AGCTCACGCA GAACCAGTAC
GCACAGGGCG TCGCCGCGCG CTCGGACGTG ATCCAGGCGC AAACGCAGTT GCAATCGGCG
CAGGCCGCCG CGATCGACAA CGGCATCGCG CGCGCGCAGT ACGAGCACGC GATCGCGACG
CTCGTCGGCG AGCCGGCGTC GACGTTCTCG CTGCCGCCGA TGCCGCTCAC GGCCGAACCG
CCCGCGATGC CGATCGATGT GCCGTCGGCG ATTCTCGAGC GGCGGCCCGA CGTCGCCGCC
GCCGAGCGGC GCGCGGCCGC CGCGAACGAG CAGATCGGCG TCGCGATCGC CGCGTTCTTC
CCCACGCTCA CGCTGTCCGC GTCGGGCGGC TTCCAGAGCT CGGTGTGGTC GCAGCTCTTC
ACGCTGCCCG CGCGCTTCTG GTCGGTCGGC CCGCAGCTCG CCGCGACGCT GTTCGACGCC
GGTCTGCGCG CCGCGCAGAC GGAAGCCGCG CGCGCGACCT ACGACCAGGA CGTCGCCGCG
TACCGGGCCG CCGTGCTGTC CGCGTTTCAG GACGTCGAGG ACAACCTCGC GTCGCAGCGC
ATCCTCGAGC AGGAAATCGC CGTGCAGCGG CAGGCGGTCG AATCCGCGCG GCATGCGCTC
GACATCACGC TCAACCAGTA CAAGGCGGGC ACGGTCGCCT ACCTGAACGT GCTGACCGCG
CAGACGACCG CATTCAGCGC GCAGCAGAAG CTCTCGACGA TTTCCGGGCA GCGGATGGTG
TCGTCGGTCG GGCTCGTGAA GGCGCTGGGC GGCGGATGGG ACGTGTCGCA GATCGCGCGC
GAGACGGGCA GCATGCAGGC GCCCGCCGCG CCGCAGCCTG CGTCTGGGCC GGCTGCGGCG
GTTGCGCCGG CGGCCACGCC CGCCGCGGCC GTTGGGCCGG CGGCCCGATC GGCGGCCGTG
GTCGCGACGG CCTCGGCCAA TGCGTCGGCC GTCCGTCCGG CCGCCACGCC CACGCAATGA
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| Protein sequence | MPQVPHPRAR RALSAAVAAA AAVLLAGCAV GPDYHRPDAA IPAAYKEAPP GWKVAQPADR
ADRGPWWSIY DDPQLNALVD KLNASNQTVA QYAAAYRQAR ALVAQARASY FPTLGLTASE
SRASSALSSG TTTRTIGNTY NVGLDASWEP DLWGKVSRTV GAQKAGEAAA AADLANARLS
AQATLAQTYF QLRAADATQK LLDDTVASYQ KSLQLTQNQY AQGVAARSDV IQAQTQLQSA
QAAAIDNGIA RAQYEHAIAT LVGEPASTFS LPPMPLTAEP PAMPIDVPSA ILERRPDVAA
AERRAAAANE QIGVAIAAFF PTLTLSASGG FQSSVWSQLF TLPARFWSVG PQLAATLFDA
GLRAAQTEAA RATYDQDVAA YRAAVLSAFQ DVEDNLASQR ILEQEIAVQR QAVESARHAL
DITLNQYKAG TVAYLNVLTA QTTAFSAQQK LSTISGQRMV SSVGLVKALG GGWDVSQIAR
ETGSMQAPAA PQPASGPAAA VAPAATPAAA VGPAARSAAV VATASANASA VRPAATPTQ
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