| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_I0003 |
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| Symbol | mnmC |
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| ID | 3849953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia thailandensis E264 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007651 |
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| Strand | - |
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| Start bp | 3101 |
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| End bp | 5074 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 637839676 |
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| Product | 5-methylaminomethyl-2-thiouridine methyltransferase |
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| Protein accession | YP_440563 |
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| Protein GI | 83720591 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating)
[COG4121] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR03197] tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTTCGCA TGACCGATCG AATCGTACCG GCGACGCTCG TCTTCCGCGA AGACGGCACC
GTCGTCTCGC CCCTCTACGG CGACATCTAC CATAGCGCGG CCGGCGCGCT CGCCCAGGCC
GATCACGTGT TCATTCGCGG CAACGACCTG CCCGAACGCT GGCGTCACAA GCGAACTTTC
ACGATCGTCG AGACGGGTTT CGGCACCGGC TGCAACTTTC TCGCGACATG GGCCGCATGG
CGCGCGGATC CGTCGCACTG CGAGCGGCTT CACTTCGTGT CGGTCGAAAA GCACCCGTTC
GCGCGCGACG ATCTGCGGCG TGCGGCCGCG CATATCGTTG CATATACAAC TATTGAGCCG
CTCGTCGACG CGCTCGCGAA CGCATGGCCC GCGTTGACGC CGGGCGTGCA TCGCCTCGAA
TTCGACGAAG GGCGCGTCAC GCTCACGCTC GCGTTCGGCG ACGCGCTCGA CGTGTTGCCG
AATCTCGCGC TGCGCGCCGA CGCGTTCTAT CTCGACGGCT TCGCTCCGTC GAAGAACGCG
GATTTATGGT CGCCCGCGAT CTTCAAATCG CTCGCGAAGC TCGCCGACGA GCACGCGACG
TTCGCGACTT ACACGAGCTC GGGCGCCGTC AAGCGCGCGC TCGACGAAGC GGGTTTCGCG
TATCGGAAAG TCGAGGGCTT CGCCGGCAAG CGCGCAATGC TCGTCGGCGA ATTCGCGCCG
CGCTGGCGAG TGCGGCGCCA CGAGCCGCCG CGAGCGCTCG ACGTCGGCAC GCGCGATGCG
ATCGTGATCG GCGCGGGGCT CGCCGGATGC GCGGCCGTCG AACGGCTCGC CGCGCGCGGT
TGGCACGTGA CGCTGATCGA GCGCCGCGAG CGAATCGCGA GCGAGGCGTC GGGCAACCCC
GCCGGCGTGT TCCACCCGAT GATCGCACGC GACGACAACC TCGCGGCCCG CCTGTCGCGC
GCCGGCTTCC TGCATGCGCT GAATCGCTGG CGCGCGCTCG AGCACGCCGG GCACACGTTC
GCGCGCAGCG CGCATGGCCT CGTGCAGCTC GCGACATCGG CCGACGAATT CGAGCTGATG
CGCGAGAGCG TCGACACGCT CGGCGTGCCG TCCGAGCTCG CACGGACGCT GTCGCGCGAT
GACGCGCAAG CGCTGTTGCG AACCGATATC GCGCACGGCG GCTGGCTGTT TCCGCAAGGC
GGCTCGATCA GCCCCGCCGC ACTCGCGGCC GCGCAGTGCG CGGCCGCGGG CGACAGGCTT
TCGCGCATCG CCGGCGTCGA AGTCGCGCGG CTCGAGCGCG GCGGCGACGG CCGCTGGCTC
GCGCTAGACG CGTCGGGTGC GACGATCGCG CAAGCGAGCG TCGTCATCGT CGCGAACGCG
GCCGATGCCG CGCGCGTCGC CGGCCTGCGG CATGCGCCGA CGCAGCGCGT GCGCGGCCAG
TTGACGCTGC TGCCGCCGGG CAGCGCGCCC GCCGTGCCGC TGCCCGCGAT CGGAGACGGC
TATGTCGTGC CGCTCGCGAA CGGCGTCACG CTGACGGGCG CAACCTACGA GCCGGACGAC
GCGGACACGA CGCTGCGCGA AGCCGGCCAT CGCGAAAACC TCGAGCGGCT CGAACGGCTG
CTGCCGGCGT TTTCCGCGCA CGCGCTCGAT GCGCACGCGC TCGCGGGACG CGTCGGCTTT
CGCTGCGTTG CGAGCGACCG ATTGCCGCTC GTCGGCGAGC TCGGCGACGA GGCGGCGGCC
GCCCGCGATG CAGCCGCGCT GACGGGCGCA AGGCTGCGCG ACGTGCCGCG CGCGGCAGGC
CTGTACGGCG CATTCGGCTA CGGCTCGCGC GGGCTCGTGT GGGCGGCGCT CGGCGCCGAG
CTGATCGCCG CGCAAATTGA AGGGGAGCCG TGGCCGCTCG AACGCGAACT CGCCGAAGCG
ATCGACCCGG CCCGCTTCCT CATTCGCGCA TTGCGGCGCG GCCGCGTCGC CTGA
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| Protein sequence | MFRMTDRIVP ATLVFREDGT VVSPLYGDIY HSAAGALAQA DHVFIRGNDL PERWRHKRTF
TIVETGFGTG CNFLATWAAW RADPSHCERL HFVSVEKHPF ARDDLRRAAA HIVAYTTIEP
LVDALANAWP ALTPGVHRLE FDEGRVTLTL AFGDALDVLP NLALRADAFY LDGFAPSKNA
DLWSPAIFKS LAKLADEHAT FATYTSSGAV KRALDEAGFA YRKVEGFAGK RAMLVGEFAP
RWRVRRHEPP RALDVGTRDA IVIGAGLAGC AAVERLAARG WHVTLIERRE RIASEASGNP
AGVFHPMIAR DDNLAARLSR AGFLHALNRW RALEHAGHTF ARSAHGLVQL ATSADEFELM
RESVDTLGVP SELARTLSRD DAQALLRTDI AHGGWLFPQG GSISPAALAA AQCAAAGDRL
SRIAGVEVAR LERGGDGRWL ALDASGATIA QASVVIVANA ADAARVAGLR HAPTQRVRGQ
LTLLPPGSAP AVPLPAIGDG YVVPLANGVT LTGATYEPDD ADTTLREAGH RENLERLERL
LPAFSAHALD AHALAGRVGF RCVASDRLPL VGELGDEAAA ARDAAALTGA RLRDVPRAAG
LYGAFGYGSR GLVWAALGAE LIAAQIEGEP WPLERELAEA IDPARFLIRA LRRGRVA
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