Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II2156 |
Symbol | |
ID | 3845766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 2646485 |
End bp | 2648179 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637839457 |
Product | squalene/phytoene synthase family protein |
Protein accession | YP_440344 |
Protein GI | 83717902 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1562] Phytoene/squalene synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTGG TCGGCCGGGC GACGCGCGGG ACGAGAGGAT TCATCACGGC GCTCGCGTAT TCGAAGGTGC GGCAAGAGGG GGCGCGAAAC CGCATCTTCA TGCATCGGCC GAACAATGCG GCGGCGGCCC TGCGCGAGGT CGCCGTGCGC GCCGTGAGAC GCGCGCGCCG CTTACTTCGC GGTTTCGTCG AGGCCGCGCT GCAACAGTTC GGTCAACAAG CCGGTCATTC CGTCCGGATG CGCGGCCGCC CGTTCGTTCA GGCGCGCGAC GAGCTCGATG TTGAGCTTGC ACGCGAACGG CACGAGGCCC TGCGCCTGCT CGAGCTTGCG CCGCTCGCGG CGATCGGTCG CGACGTCTTC GGCGCCCTTG CCGAAGCGCG CGGACGTCGT CTGCTTCATC GCGTGCGTCA GCTTCAACGC CTTGTTCTTC TCGAGATCGG TTTTCTTCAT CGCCATCGCG GTCACCTCTT GCAGGAAAGG ATGCGATTGT ACGCATTGCC GCGCGGCGCG GATATCGGCC GCCGCTCGCC GTGTCGCGCG CGCGACCGCG GCCCCCGCGG CCGGCCGTGC GCGAAGCGCC GGCGGCCCGC GCGCATTTGC CGATACAATG CGGCAGCCAT TCGTATGACC GACCTGATCC GATCCATGGG CAACTCCACC CGGGCCTTTC TGCTGGGCCC TTTGCTGAAG GGGGTCTCGC GCTCCTTCTA TCTGACGCTG CGCGTGCTGC CGGAAGGCAT GCGCGATCCG ATCGGCCTCG CGTACCTGCT CGCTCGCGCG GCCGACACGA TCGCCGACAC GTCGCTGATT CCGCCCGCGC AGCGGCTCGA ACTGCTGCTG TCGCTGCGCG CGCAGATCAA CGGCGTGCCC GATCCGCAAG CGCTCGCGCG GATCGCGGGC GAGGTCGCGG GGCAGCAGAC GCAGTCGGAC GAGAAAACGC TGCTCGAATC GCTCGGCCCC GCGCTCGCGG TGCTGTCGCA ATTGAGCGCG TTCGATCGCG CCGCGGTGCG CGGCGTCGTC ACGACGCTCA CCGAAGGGAT GGAATTCGAT TTGCGCACGT TCCCGGACGA ATCGTCGGGC CGCATCGTCG CGCTGCGCGA ATGGCCGCAG CTCGATCGCT ACACGTACCT CGTCGCCGGC TGCGTCGGCG AGTTCTGGAC GAGGATGACG TGCGCGCATC TGCCCGGCCT GCTGAGCGAG CGCGAGGACA CGATGGCCGA GCGCGGCATC CGTTTCGGCA AGGCGCTGCA GATGACCAAC GTGCTGCGCG ACTGCGGCAA GGATCTGCGG ATCGGCCGCT GCTATCTGCC GCAGGCGATG CTGAGCGAAT ACGGGCTGTG CGCGGAAGAC CTGTTGCGGC CGGACGCTTC GCCGCGCGCG CGGCCGCTGA TGCATGCGCT CGTGCGCACG ACGCTCGAGC ATTTCCGCGC GGGCATCGAC TACACGTTCG CGATTCCGCG CCGCGCGCCG CGCCTGCGGC TTGCCTGCTT CTGGCCGATC GCGATCGGCC TGCAGACGCT CGCGCTGCTC GCGTCGAACG ACGCGTGGCT CGATCCGGCG CGCGCGTCGA AGGTGCGGCG CGGCGACGTC TACCGGATCA TCGCGTATTC GCTGCCGCTC GCGATGTCGA ACCGCGCGTT GCGCGCGTGG CTCGACCGCC TGATCGCGGA CGTCGAGGCT CGGCTCGCGG CGTGA
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Protein sequence | MSLVGRATRG TRGFITALAY SKVRQEGARN RIFMHRPNNA AAALREVAVR AVRRARRLLR GFVEAALQQF GQQAGHSVRM RGRPFVQARD ELDVELARER HEALRLLELA PLAAIGRDVF GALAEARGRR LLHRVRQLQR LVLLEIGFLH RHRGHLLQER MRLYALPRGA DIGRRSPCRA RDRGPRGRPC AKRRRPARIC RYNAAAIRMT DLIRSMGNST RAFLLGPLLK GVSRSFYLTL RVLPEGMRDP IGLAYLLARA ADTIADTSLI PPAQRLELLL SLRAQINGVP DPQALARIAG EVAGQQTQSD EKTLLESLGP ALAVLSQLSA FDRAAVRGVV TTLTEGMEFD LRTFPDESSG RIVALREWPQ LDRYTYLVAG CVGEFWTRMT CAHLPGLLSE REDTMAERGI RFGKALQMTN VLRDCGKDLR IGRCYLPQAM LSEYGLCAED LLRPDASPRA RPLMHALVRT TLEHFRAGID YTFAIPRRAP RLRLACFWPI AIGLQTLALL ASNDAWLDPA RASKVRRGDV YRIIAYSLPL AMSNRALRAW LDRLIADVEA RLAA
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