| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II2119 |
|---|
| Symbol | gabT |
|---|
| ID | 3845625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 2601894 |
|---|
| End bp | 2603177 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637839420 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_440307 |
|---|
| Protein GI | 83718286 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.22947 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAACAATG CCGATCTGCA CGCCCGCAAG AACGCCGCGA CGCCGCGTGG CGTCGGCGTG
ATGTGCGACT TCTACGCCGC GCGCGCCGAG AACGCCGAGC TGTGGGACGT CGAGGGCCGC
CGCTTCATCG ATTTCGCGGC CGGCATCGCG GTGCTGAACA CGGGCCACCG CCACCCGAAG
ATCGTGAAGG CGATCGCCGA GCAGCTCGAG CAGTTCACGC ACACCGCGTA CCAGATCGTG
CCGTACGCGT CGTACGTCGA GCTCGCCGAA AAGATCAACG CGCGCGCGCC GATCGCGCAG
CCGAAGAAGA CCGCGTTCTT CACGACGGGC GCGGAAGCGG TCGAGAACGC GGTGAAGATC
GCGCGCGCTT ACACCGGCCG GCCGGGCGTG ATCGCGTTCG CGGGCGGCTT CCACGGCCGC
ACGATGATGG GCATGGCGCT CACCGGCAAG GTCGCACCGT ACAAGATCGG CTTCGGCCCG
TTCCCGGGCG ACGTGTTCCA CGCGCCGTAT CCGAACGCGC TGCGCGGCGT GACGAGCGCC
GATTCGATCG CCGCCGTCGA AACGCTGTTC AAGGCCGACA TCGATCCGAA GCGCGTCGCC
GCGATCATCT TCGAACCGGT GCAGGGCGAA GGCGGCTTCA ACCCGGCGCC CGCCGAGTTC
GTGCGCGCGC TGCGCAAGCT GTGCGACGCG CACGGCATCC TCCTCATCGC CGACGAAGTG
CAAACGGGCT TCGCGCGCAC GGGCAAGCTG TTCGCGATGG AGCACTACGA CGTCTCGGCC
GATCTGATGA CGATCGCCAA GAGCCTCGCG GGCGGGATGC CGCTGTCGGG CGTCGTCGGC
CGCGCGGACG TGATGGACGC GGCCGCGCCG GGCGGCCTGG GCGGCACGTA CGCGGGCAAT
CCGCTCGCGG TGGCCGCCGC GCACGCCGTG CTCGACGTGA TCGACGAGGA GAAGCTCGCC
GAGCGCGCGG CCGTGCTCGG CGACAAGCTG AAGGCGAAGC TCGCCGCGCT GCGCGCCGAC
GTGCCGCAGA TCGCCGACGT GCGCGGCCCG GGCGCGATGG TAGCCGCGGA ATTCGTCGAT
CCGGACACGC GCGCGTCCGA CGCCGCGTTC ACGAAGCGCG TGCAGACGCT CGCGCTCGAG
CGCGGCCTGC TGCTGCTCAT CTGCGGCGTC GACGCGAACG TGATACGTTT CCTGTTTCCG
CTCACGATTC AGGATGCCGT GTTCGACGAA GCGCTCGGCA TTCTCGAAAG CGTGCTGAAG
GAGGCGGTGG GCGTACCCGC CTGA
|
|---|
| Protein sequence | MNNADLHARK NAATPRGVGV MCDFYAARAE NAELWDVEGR RFIDFAAGIA VLNTGHRHPK
IVKAIAEQLE QFTHTAYQIV PYASYVELAE KINARAPIAQ PKKTAFFTTG AEAVENAVKI
ARAYTGRPGV IAFAGGFHGR TMMGMALTGK VAPYKIGFGP FPGDVFHAPY PNALRGVTSA
DSIAAVETLF KADIDPKRVA AIIFEPVQGE GGFNPAPAEF VRALRKLCDA HGILLIADEV
QTGFARTGKL FAMEHYDVSA DLMTIAKSLA GGMPLSGVVG RADVMDAAAP GGLGGTYAGN
PLAVAAAHAV LDVIDEEKLA ERAAVLGDKL KAKLAALRAD VPQIADVRGP GAMVAAEFVD
PDTRASDAAF TKRVQTLALE RGLLLLICGV DANVIRFLFP LTIQDAVFDE ALGILESVLK
EAVGVPA
|
|---|
| |