| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1996 |
|---|
| Symbol | |
|---|
| ID | 3846408 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 2442483 |
|---|
| End bp | 2443055 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 637839297 |
|---|
| Product | bacteriophage integrase family protein |
|---|
| Protein accession | YP_440190 |
|---|
| Protein GI | 83717581 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4973] Site-specific recombinase XerC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0601499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTCGGT TTGCATTTTG GACTGGGCTA CGTACTTCGG AGCTTGTCGC GCTCAATTGG
ACGGATGTCG ATTGGAAACG CGGCGTGATA GTCGTCAAAC GGGCTTTGAC CCAAACAGCA
AAGGAGGCAG AGGACACAAA GACACGTTCA AGTCGCCGGG AGGTAAAGCT CTTGCCGCCT
GCCATGTCTG CACTAGTCGC CCAAAAGGCT CACACGTATC TACAAGGCCG GGAAGTATTT
CAGGACCCGC GAAACGCTGC TCGATGGGCC GGGGACTCCC CCATCCGGAT CGTGTGGACT
CGGGGACTAA AGCAAGCACA GGTCAGATAC AGGAAGCCTT ACCAGACGCG CCACACATAC
GCCTCTATGA TGCTCTCCGC TGGGGAACAT CCAATGTGGG TAGCTCGCCA AATGGACCAT
TCGAACCAGA ACACAACCGT TCGAATCTAC GCTAGGTGGA TGCCTACGGC GGACCCCGAT
GCAGGAGGAA AGGCAGTGGA GAAGTTTGCG GAATCGACGT TGCGATTAAG TTGCGATTCC
GTACAGAAAA CAGCAGGGAA TCAAGGCAAT TAA
|
|---|
| Protein sequence | MFRFAFWTGL RTSELVALNW TDVDWKRGVI VVKRALTQTA KEAEDTKTRS SRREVKLLPP
AMSALVAQKA HTYLQGREVF QDPRNAARWA GDSPIRIVWT RGLKQAQVRY RKPYQTRHTY
ASMMLSAGEH PMWVARQMDH SNQNTTVRIY ARWMPTADPD AGGKAVEKFA ESTLRLSCDS
VQKTAGNQGN
|
|---|
| |