| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1899 |
|---|
| Symbol | |
|---|
| ID | 3846375 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 2304861 |
|---|
| End bp | 2305388 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637839200 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_440093 |
|---|
| Protein GI | 83718015 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
|---|
| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATG CTTTGGTTGA TTACTTCTTG CAGATCGACG GCGTCGAGGG TGAGTCGACC
GATTCGCAAT ATCCCGGTCT GATCCAGATT CAGAGCTGGC AGTGGGCGGA AGAGAACTCG
GGCCGCTGGG GCTTCGGCAG CGGCGGCGGC GCGGGCAAGG TCGAGATGAA GGACTTCGAG
TTCCGCATGG TGTCGAACAA GGCTTCGCCG AAGCTGTTCC TGATGTGTGC GACGGGTGAG
CACATCCAGA ACGCGAAGCT GATCTGCCGC AAGTCGGGCA AGGGCCAGCA GGAATTCCTG
ACGATCTCGT TCGCGAGCGG CCTCGTCTCG TCGTTCCGCA CGCTCGGCAA CATGCCGATC
TCGCAGCTCG GCCACGCTAG CGGCGAAGTC GACGGCGTGC TGCCGACCGA CCAGATCCGG
ATCAACTTCG CCCAGATCGA GTTCGAGTAC CGCGAGCAGC GCAACGACGG CACGATGGGC
GCAGTGATCA AGGCCGGATA CGACCTCAAG CAGAACGCCC CGATCTAA
|
|---|
| Protein sequence | MANALVDYFL QIDGVEGEST DSQYPGLIQI QSWQWAEENS GRWGFGSGGG AGKVEMKDFE
FRMVSNKASP KLFLMCATGE HIQNAKLICR KSGKGQQEFL TISFASGLVS SFRTLGNMPI
SQLGHASGEV DGVLPTDQIR INFAQIEFEY REQRNDGTMG AVIKAGYDLK QNAPI
|
|---|
| |