Gene BTH_II1643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1643 
Symbol 
ID3846282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1927527 
End bp1928681 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content66% 
IMG OID637838944 
Productouter membrane porin OpcP 
Protein accessionYP_439837 
Protein GI83717514 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.262884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAAACA TCCGGTTTGC ATGCGCAACC GCAGGGGTCC TGGCCGCGAC GGCCGCACAC 
GCGCAGAGCT CGGTCACGCT GTACGGCCTG ATCGACGCGG GCATCATGTA CACGAACAAC
GTCGCGAGCG GCAATTCGCA CGGCGGCCTC GTGCAGGCGA CGACGGGCGC CGTGAACGGC
ACCCGCTTCG GCCTGCGGGG CACCGAGGAT CTCGGCGGCG GCCTGAAGGC GCTGTTCGTG
CTGGAGAACG GCTTCAACGT CGAGAACGGC AAGCTGGGCC AGGACGGCCG GCTGTTCGGC
CGGTTCGCGT ATGTGGGGCT GTCCGACGAT CGTTTCGGCA CCCTGACGAT CGGCCGGCAA
TACGATTCGC TCGTCGATTT CGTCGCGCCG CTGTCGGCGA CGGCGGGCAC GTTCGGCGAC
GCGAGCTTCG CGCATCCGTT CGACAACGAC AACCTGAACC ACTCGCTGCG GATCAACAAC
GCGATCAAGT ACACGAGCAA CACGTACGCG GGCCTGAAGT TCGGCGGCAT GTACGCGATG
TCGAACAGCA CCGATTTCGC GACGAACCGC GCATACAGCT TCGGCGCGAG CTACACGCGC
GGGCCGCTGA ACGTCGCGGC CGGCTATCTG CAGATCAATG GCTCGAAGGG CACGACCGCG
GGCAGCCCGG GCGCGGTCGA CATCGTCGAA TCGGCGGCGA ACGGCAAGGG CGGCTTCTCG
CTCGGCGCGG ACCGGATGCG CTCGTACGGC GGCGGCCTGA ACTACGCGTT CGGCCCCGCG
ACGCTCGGCT TCGTCTACAC GCGCGCCGAA TACGAGAACA CCGCATCGTT CGGCTCGACG
GGCGGCACGG TGCGTTTCGA CAACTACGAG CTGAACGGCA AGTATCAACT GACGCCCGCG
TTCAGCGTCG GCGGCGCGTA CACGTACACG AACGGCCACG TCGAGAACAC CGTCAAATAC
GGTTCCGATC CGAAGTGGCA TCAGGTCGAC CTGATGGCGG TGTACCGCTT GTCGGTGCGC
ACCGACGTCT ACCTCGAAGG CATGTACCAG CATGCGTCGG GCCGCAATTA CGTCGCGATG
ATCAACACCG CGGGTGGCGC GTCGTCGACG GGCAATCAAG TCGTCGCGGC GGTCGGCCTG
CGCACGCGCT TCTGA
 
Protein sequence
MKNIRFACAT AGVLAATAAH AQSSVTLYGL IDAGIMYTNN VASGNSHGGL VQATTGAVNG 
TRFGLRGTED LGGGLKALFV LENGFNVENG KLGQDGRLFG RFAYVGLSDD RFGTLTIGRQ
YDSLVDFVAP LSATAGTFGD ASFAHPFDND NLNHSLRINN AIKYTSNTYA GLKFGGMYAM
SNSTDFATNR AYSFGASYTR GPLNVAAGYL QINGSKGTTA GSPGAVDIVE SAANGKGGFS
LGADRMRSYG GGLNYAFGPA TLGFVYTRAE YENTASFGST GGTVRFDNYE LNGKYQLTPA
FSVGGAYTYT NGHVENTVKY GSDPKWHQVD LMAVYRLSVR TDVYLEGMYQ HASGRNYVAM
INTAGGASST GNQVVAAVGL RTRF