Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1643 |
Symbol | |
ID | 3846282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 1927527 |
End bp | 1928681 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637838944 |
Product | outer membrane porin OpcP |
Protein accession | YP_439837 |
Protein GI | 83717514 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.262884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAACA TCCGGTTTGC ATGCGCAACC GCAGGGGTCC TGGCCGCGAC GGCCGCACAC GCGCAGAGCT CGGTCACGCT GTACGGCCTG ATCGACGCGG GCATCATGTA CACGAACAAC GTCGCGAGCG GCAATTCGCA CGGCGGCCTC GTGCAGGCGA CGACGGGCGC CGTGAACGGC ACCCGCTTCG GCCTGCGGGG CACCGAGGAT CTCGGCGGCG GCCTGAAGGC GCTGTTCGTG CTGGAGAACG GCTTCAACGT CGAGAACGGC AAGCTGGGCC AGGACGGCCG GCTGTTCGGC CGGTTCGCGT ATGTGGGGCT GTCCGACGAT CGTTTCGGCA CCCTGACGAT CGGCCGGCAA TACGATTCGC TCGTCGATTT CGTCGCGCCG CTGTCGGCGA CGGCGGGCAC GTTCGGCGAC GCGAGCTTCG CGCATCCGTT CGACAACGAC AACCTGAACC ACTCGCTGCG GATCAACAAC GCGATCAAGT ACACGAGCAA CACGTACGCG GGCCTGAAGT TCGGCGGCAT GTACGCGATG TCGAACAGCA CCGATTTCGC GACGAACCGC GCATACAGCT TCGGCGCGAG CTACACGCGC GGGCCGCTGA ACGTCGCGGC CGGCTATCTG CAGATCAATG GCTCGAAGGG CACGACCGCG GGCAGCCCGG GCGCGGTCGA CATCGTCGAA TCGGCGGCGA ACGGCAAGGG CGGCTTCTCG CTCGGCGCGG ACCGGATGCG CTCGTACGGC GGCGGCCTGA ACTACGCGTT CGGCCCCGCG ACGCTCGGCT TCGTCTACAC GCGCGCCGAA TACGAGAACA CCGCATCGTT CGGCTCGACG GGCGGCACGG TGCGTTTCGA CAACTACGAG CTGAACGGCA AGTATCAACT GACGCCCGCG TTCAGCGTCG GCGGCGCGTA CACGTACACG AACGGCCACG TCGAGAACAC CGTCAAATAC GGTTCCGATC CGAAGTGGCA TCAGGTCGAC CTGATGGCGG TGTACCGCTT GTCGGTGCGC ACCGACGTCT ACCTCGAAGG CATGTACCAG CATGCGTCGG GCCGCAATTA CGTCGCGATG ATCAACACCG CGGGTGGCGC GTCGTCGACG GGCAATCAAG TCGTCGCGGC GGTCGGCCTG CGCACGCGCT TCTGA
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Protein sequence | MKNIRFACAT AGVLAATAAH AQSSVTLYGL IDAGIMYTNN VASGNSHGGL VQATTGAVNG TRFGLRGTED LGGGLKALFV LENGFNVENG KLGQDGRLFG RFAYVGLSDD RFGTLTIGRQ YDSLVDFVAP LSATAGTFGD ASFAHPFDND NLNHSLRINN AIKYTSNTYA GLKFGGMYAM SNSTDFATNR AYSFGASYTR GPLNVAAGYL QINGSKGTTA GSPGAVDIVE SAANGKGGFS LGADRMRSYG GGLNYAFGPA TLGFVYTRAE YENTASFGST GGTVRFDNYE LNGKYQLTPA FSVGGAYTYT NGHVENTVKY GSDPKWHQVD LMAVYRLSVR TDVYLEGMYQ HASGRNYVAM INTAGGASST GNQVVAAVGL RTRF
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