| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1626 |
|---|
| Symbol | araH |
|---|
| ID | 3844788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | - |
|---|
| Start bp | 1904498 |
|---|
| End bp | 1905517 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637838927 |
|---|
| Product | L-arabinose transporter permease protein |
|---|
| Protein accession | YP_439820 |
|---|
| Protein GI | 83717881 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCAAG CCATGCAACC CCAAGGCACT TCTTCTTCTC CCGATACCCG GGCTAGCGTC
GCGCCGCCGC GCGCGGCCGC GCGGGATCTC CTCAACCGCT CCGGCATCGT CGTCGCGTTC
GTCGTGCTGT TCGCGGCGCT CGCGATCGCC GTGCCGGACT TCCTGACGGC CCGCAACATC
CAGGGCCTGT TGCTGTCGGT CACGCTGATC GGCTCGATCG CGGTGACGAT GATGTTCGTG
CTCGCGCTGG GCGAGGTCGA CCTGTCGGTC GCGTCGATCG TCGCGTTCTC GGGCGTCGTC
GCATCGACGC TCATCACGGC GACGCACAGC ATCGCGCTCG GCGTCGCGGC GGGCGTGCTC
GCGGGCGGCG CGGTCGGCCT CGTCAACGGC GTGCTGATCG CGCGCTGGCG GATCAACTCG
CTGATCGTCA CGCTCGCGAT GATGGAGGTC GTGCGCGGGC TCGCGTTCAT CACGTCGAAC
GGCGACGCGG TGATGATCTC CGAGGAGCGC TTCTTCGCGC TCGGCTCGGG ATCGTTCCTC
GGCATCTCGT ATCCGATCTG GAGCAACATC GTCGGCTTCG TCGCGTTCGG CTTCCTGCTG
CGCAAGACGG TGTTCGGCAA GAACGTGCTC GCCGTCGGCG GCAACGGCGA GGCGGCGCTG
CTCGCCGGCC TGCCCGTCAC GCGGATCAAG ATCACCGTGT TCGTGCTGCA GGGGCTCGTG
ACGGGCTTCG CCGGCGTGAT GCTCGCGTCG CGGATGAGCC TCGGCGACCC GAAGACGTCG
GTCGGCCTCG AGCTCGGCGT GATTTCCGCG TGCGTGCTGG GCGGCGTGTC GCTCACGGGC
GGCGTCGCGA CGATTTCGGG CGTGCTCGTC GGCGTGCTGA TCATGGGCTC GGTGCAGGAC
GCGATGAGCC TTCTCAACGT GCCGACGTTT TACCAATATC TGATACGCGG CGGCATTCTG
TTGCTCGCGG TGCTGTTCGA CCAGTATCGT CGCAATCGGC GGCGCGCGAT GCGGGGCTGA
|
|---|
| Protein sequence | MSQAMQPQGT SSSPDTRASV APPRAAARDL LNRSGIVVAF VVLFAALAIA VPDFLTARNI
QGLLLSVTLI GSIAVTMMFV LALGEVDLSV ASIVAFSGVV ASTLITATHS IALGVAAGVL
AGGAVGLVNG VLIARWRINS LIVTLAMMEV VRGLAFITSN GDAVMISEER FFALGSGSFL
GISYPIWSNI VGFVAFGFLL RKTVFGKNVL AVGGNGEAAL LAGLPVTRIK ITVFVLQGLV
TGFAGVMLAS RMSLGDPKTS VGLELGVISA CVLGGVSLTG GVATISGVLV GVLIMGSVQD
AMSLLNVPTF YQYLIRGGIL LLAVLFDQYR RNRRRAMRG
|
|---|
| |