Gene BTH_II1570 details

Gene Information

• Locus tag: BTH_II1570
• ID: 3845426
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia thailandensis E264
• Kingdom: Bacteria
• Replicon accession: NC_007650
• Strand: +
• Start bp: 1842883
• End bp: 1843530
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637838871
• Product: LuxR family DNA-binding response regulator
• Protein accession: YP_439765
• Protein GI: 83716628
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.17909
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCAAGG TTCTGATTGC CGACGACCAC GCGCTCGTGC GCGACGGCCT ACGCCATATC 
CTGCAGAATG CGGCCGGCTA CGAAGTCGCC GGCGAAGCCT TCGACAGCGC GACGACGATC 
GCGCTCGTGC GCTCGACGCC CGCGCAAGTG CTCGTGCTCG ACCTGTCGAT GCCGGGCCGC 
AACGGCGTCG AGCTGATCAA GCAGATCAAG GAAGAGAAGC CCTCGCTGCG GATTCTGGTG 
CTGACGATGC ACGCGGAGCA GCAGTACGCG GTGCGCGCGT TCCGCGCGGG CGCGTCCGGC 
TATCTGACGA AGGAAAGCGC GAGCTCGGAG CTCGTCGGCG CGGTGACGAA GGTCGCCTCG 
GGCGGCGTCT ACGTCAGCCT CGCGATGGCC GAGCGCTTCG CGCAGAGCCT GAACGAGCCG 
GCGGAGACGC TGCCGCACCA CCGGCTGTCG GATCGCGAGT TCGACGTGTT CCGCCGCATC 
GCGTCCGGCC AGACGCTCAC GCAGATCGCC GACGAGCTGT GCGTCAGCGC GAAGACGGTC 
AGCACGTACA AGACGCGGAT TCTCGAGAAG ATGCAGATGC CGCACGAAGC GGCGCTCGTG 
CGCTACGCGT TGCGGCACAA GCTGATCGAC GATCCGGACG AGGATTGA 

 

Protein sequence

MIKVLIADDH ALVRDGLRHI LQNAAGYEVA GEAFDSATTI ALVRSTPAQV LVLDLSMPGR 
NGVELIKQIK EEKPSLRILV LTMHAEQQYA VRAFRAGASG YLTKESASSE LVGAVTKVAS 
GGVYVSLAMA ERFAQSLNEP AETLPHHRLS DREFDVFRRI ASGQTLTQIA DELCVSAKTV 
STYKTRILEK MQMPHEAALV RYALRHKLID DPDED