Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1412 |
Symbol | |
ID | 3845209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 1663877 |
End bp | 1664992 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637838714 |
Product | porin |
Protein accession | YP_439608 |
Protein GI | 83716840 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.170387 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTTC AATCGAGAAG AATGCTGGTC GCGCTCGTCG CGGCCGGGCC GGCGCTCGCG TGCGCGCAGA CGAGCGTCAC GCTGTACGGC CGCGTCGACG GCGGCGTCGA ATATCTGAAT CACATCGCGA ATCCTTCGGG CGGCAGCGCG TCGCGCTGGA GCGCCGAGAG CGGCGACTGG GGCACGAGCA TGTTCGGCCT GAAAGGCGCC GAGGATCTGG GCGGCCGCAC GTCGGCGATC TTCAACCTGG AGACCGCGTT CCAGGTGATG AACGGCACGA CGGGCGGCGG CCGGATGTGG TCGCGGCGTG CGTACGTCGG CTTGAAGAAC GACACGTGGG GCACGCTGCA GGCGGGCCGC AACCTCTTCA TCGACAGCGA CGGCGTGTGG GAATTCGATC CGTTCGTCCA GCAGGCGTTC TCGTCGGCGT CGCTCGTGCG CGGGCGCAAC TGGCAGCAGA CGAGCAACAA CGTCGAGTAC CACAGCCCGG TGTTCGGCGG CTTCGACGTG CAGGCGCAGT ATGCGTTCGG CAATCAGTCG CGCGGCTTCA ACTACGGTGC GCAGGGCGAC TTCGGCCGCT CCGACGGCGT GATGATCTCG TATCACTCGC CGATGCTCGA CGTGCGCGGC ATGTACGACG AGTTGCGCGA CAGCAACGGC CGGATGAGCA ACATCTTCTC CAGCTCGCGC GAGTATTTCG TCGGCGCGAA CGTGAAGGTG CAGAAGTTCA AGATCCAGGG CGCCTACACG CATTACTCCG CACCGGATAC GCCGGCGGGC CTCGCGGATC GCGCCGATCA CTTCTGGCTC GGCGCGACGT ATCAGGCCAC CCCGCAATGG GCGGTGACGG GCGGCGGCTA CTACGTGCGC GTGCGCGGCG GCGACGGCAG TGACGCGTCG CACGATCCGT CGGGCCACGC GACCATGTAT GCGCTGGGGA CGACTTACAA CCTGTCGAAG CGGACTTTCC TGTACGGCAC GCTCGCCTAC GTGCGCAACG GCGGGAACTC GAACTTCTCG CTGCTCGCGA CGCCGCGCGA CGCGACGCCG AACACGAGCC CGCTCGCGGG GGAATCGCAA ACGGGCGCGT ATGCCGGGAT GATGCATACG TTCTGA
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Protein sequence | MGFQSRRMLV ALVAAGPALA CAQTSVTLYG RVDGGVEYLN HIANPSGGSA SRWSAESGDW GTSMFGLKGA EDLGGRTSAI FNLETAFQVM NGTTGGGRMW SRRAYVGLKN DTWGTLQAGR NLFIDSDGVW EFDPFVQQAF SSASLVRGRN WQQTSNNVEY HSPVFGGFDV QAQYAFGNQS RGFNYGAQGD FGRSDGVMIS YHSPMLDVRG MYDELRDSNG RMSNIFSSSR EYFVGANVKV QKFKIQGAYT HYSAPDTPAG LADRADHFWL GATYQATPQW AVTGGGYYVR VRGGDGSDAS HDPSGHATMY ALGTTYNLSK RTFLYGTLAY VRNGGNSNFS LLATPRDATP NTSPLAGESQ TGAYAGMMHT F
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