Gene BTH_II1412 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1412 
Symbol 
ID3845209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1663877 
End bp1664992 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID637838714 
Productporin 
Protein accessionYP_439608 
Protein GI83716840 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.170387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTTTC AATCGAGAAG AATGCTGGTC GCGCTCGTCG CGGCCGGGCC GGCGCTCGCG 
TGCGCGCAGA CGAGCGTCAC GCTGTACGGC CGCGTCGACG GCGGCGTCGA ATATCTGAAT
CACATCGCGA ATCCTTCGGG CGGCAGCGCG TCGCGCTGGA GCGCCGAGAG CGGCGACTGG
GGCACGAGCA TGTTCGGCCT GAAAGGCGCC GAGGATCTGG GCGGCCGCAC GTCGGCGATC
TTCAACCTGG AGACCGCGTT CCAGGTGATG AACGGCACGA CGGGCGGCGG CCGGATGTGG
TCGCGGCGTG CGTACGTCGG CTTGAAGAAC GACACGTGGG GCACGCTGCA GGCGGGCCGC
AACCTCTTCA TCGACAGCGA CGGCGTGTGG GAATTCGATC CGTTCGTCCA GCAGGCGTTC
TCGTCGGCGT CGCTCGTGCG CGGGCGCAAC TGGCAGCAGA CGAGCAACAA CGTCGAGTAC
CACAGCCCGG TGTTCGGCGG CTTCGACGTG CAGGCGCAGT ATGCGTTCGG CAATCAGTCG
CGCGGCTTCA ACTACGGTGC GCAGGGCGAC TTCGGCCGCT CCGACGGCGT GATGATCTCG
TATCACTCGC CGATGCTCGA CGTGCGCGGC ATGTACGACG AGTTGCGCGA CAGCAACGGC
CGGATGAGCA ACATCTTCTC CAGCTCGCGC GAGTATTTCG TCGGCGCGAA CGTGAAGGTG
CAGAAGTTCA AGATCCAGGG CGCCTACACG CATTACTCCG CACCGGATAC GCCGGCGGGC
CTCGCGGATC GCGCCGATCA CTTCTGGCTC GGCGCGACGT ATCAGGCCAC CCCGCAATGG
GCGGTGACGG GCGGCGGCTA CTACGTGCGC GTGCGCGGCG GCGACGGCAG TGACGCGTCG
CACGATCCGT CGGGCCACGC GACCATGTAT GCGCTGGGGA CGACTTACAA CCTGTCGAAG
CGGACTTTCC TGTACGGCAC GCTCGCCTAC GTGCGCAACG GCGGGAACTC GAACTTCTCG
CTGCTCGCGA CGCCGCGCGA CGCGACGCCG AACACGAGCC CGCTCGCGGG GGAATCGCAA
ACGGGCGCGT ATGCCGGGAT GATGCATACG TTCTGA
 
Protein sequence
MGFQSRRMLV ALVAAGPALA CAQTSVTLYG RVDGGVEYLN HIANPSGGSA SRWSAESGDW 
GTSMFGLKGA EDLGGRTSAI FNLETAFQVM NGTTGGGRMW SRRAYVGLKN DTWGTLQAGR
NLFIDSDGVW EFDPFVQQAF SSASLVRGRN WQQTSNNVEY HSPVFGGFDV QAQYAFGNQS
RGFNYGAQGD FGRSDGVMIS YHSPMLDVRG MYDELRDSNG RMSNIFSSSR EYFVGANVKV
QKFKIQGAYT HYSAPDTPAG LADRADHFWL GATYQATPQW AVTGGGYYVR VRGGDGSDAS
HDPSGHATMY ALGTTYNLSK RTFLYGTLAY VRNGGNSNFS LLATPRDATP NTSPLAGESQ
TGAYAGMMHT F