Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1387 |
Symbol | |
ID | 3845287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 1637289 |
End bp | 1637810 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637838689 |
Product | ECF subfamily RNA polymerase sigma factor |
Protein accession | YP_439583 |
Protein GI | 83716762 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00286946 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCTTCG AATCGGACGT CGTCGGCTGG CTGCCGCAGC TGCGGCGCTA TGCGCGCGCG CTGACGGGCG ATGCCGCGTG GGCCGACGAT CTCGTACAGG ACACCGCCGA GCGCGCGCTG TCGCGAATGG GCGCGTTTCG TCCCGACAGC AACCTGCGTG CGTGGCTGCT GACGATCCTG CGCCACCTGT ACATCGATCA GTTGCGCGCG CGCCGCGAAT TCGCCGTCGA CGACGACGAC GGCCCGTGGC GCACGCTCGA GGCGCCCGTC GGCCAGGTCG ACGCGCTCGT GCTGCGCGAC GTGCAGCGGA TGCTGTACCG GCTGCCGCTC GATCAGCGCG AGGTGCTGCT GCTCGTGTGC GTCGAGGAGT TGAGCTACCA GGAGGCGTCG GCGGTGCTGG GCGTGCCCGT CGGCACGGTG ATGTCGAGGC TCTCGCGCGC GCGGGAGCAC ATGCGCGCGC TGTTGACCGG CGCACCGCGG CGGCCGCCGC TGTCACTCGC CACTGCGAGG CATCATCGAT GA
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Protein sequence | MSFESDVVGW LPQLRRYARA LTGDAAWADD LVQDTAERAL SRMGAFRPDS NLRAWLLTIL RHLYIDQLRA RREFAVDDDD GPWRTLEAPV GQVDALVLRD VQRMLYRLPL DQREVLLLVC VEELSYQEAS AVLGVPVGTV MSRLSRAREH MRALLTGAPR RPPLSLATAR HHR
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