Gene BTH_II1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1387 
Symbol 
ID3845287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1637289 
End bp1637810 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content71% 
IMG OID637838689 
ProductECF subfamily RNA polymerase sigma factor 
Protein accessionYP_439583 
Protein GI83716762 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00286946 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCTTCG AATCGGACGT CGTCGGCTGG CTGCCGCAGC TGCGGCGCTA TGCGCGCGCG 
CTGACGGGCG ATGCCGCGTG GGCCGACGAT CTCGTACAGG ACACCGCCGA GCGCGCGCTG
TCGCGAATGG GCGCGTTTCG TCCCGACAGC AACCTGCGTG CGTGGCTGCT GACGATCCTG
CGCCACCTGT ACATCGATCA GTTGCGCGCG CGCCGCGAAT TCGCCGTCGA CGACGACGAC
GGCCCGTGGC GCACGCTCGA GGCGCCCGTC GGCCAGGTCG ACGCGCTCGT GCTGCGCGAC
GTGCAGCGGA TGCTGTACCG GCTGCCGCTC GATCAGCGCG AGGTGCTGCT GCTCGTGTGC
GTCGAGGAGT TGAGCTACCA GGAGGCGTCG GCGGTGCTGG GCGTGCCCGT CGGCACGGTG
ATGTCGAGGC TCTCGCGCGC GCGGGAGCAC ATGCGCGCGC TGTTGACCGG CGCACCGCGG
CGGCCGCCGC TGTCACTCGC CACTGCGAGG CATCATCGAT GA
 
Protein sequence
MSFESDVVGW LPQLRRYARA LTGDAAWADD LVQDTAERAL SRMGAFRPDS NLRAWLLTIL 
RHLYIDQLRA RREFAVDDDD GPWRTLEAPV GQVDALVLRD VQRMLYRLPL DQREVLLLVC
VEELSYQEAS AVLGVPVGTV MSRLSRAREH MRALLTGAPR RPPLSLATAR HHR