Gene BTH_II1295 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1295 
Symbol 
ID3846263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1544048 
End bp1545178 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content67% 
IMG OID637838597 
ProductABC transporter permease protein 
Protein accessionYP_439491 
Protein GI83716969 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0481069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGACC GCGTGCAATC GATGCTCGTC AAGGAACTGC TGCAGCTCAA GCGCGACCGC 
TGGGCGCTGA TCCGGCTGTT CGTGCCGCTC GTCGTGCAGG TGATCGTCTA CGGCTACGCG
GCGACCTTCA CCGTCAATCA CGTCGCGACG GCGCTGCTCG ATCTCGACCG CAGCGACGCG
AGCCGGGATC TCGTGTCGCA CTTCGTCGCG ACAGGGCGAT TCGACATCGT CGACGTCGCG
GCGAGCGACG ACGCGATCCG GCGCGACATC GACGGCGGCC GCGCGGAGTT CGCGATCGTG
ATCCACGCGG GCTTCTCGCA GTTTCTCGGC AACGGGCGAA CCGCGCCGCT TCAGGTGATC
GTCGACGGCA CGAATTCGAA CACCGCGCTG ATCGCGCTCG GCTACGCGAG CCAGATCGTC
GCGCGGTTCC AGGCCGACCG GGCGTCGCGC GCGTGGCCGG CGAGCGCGGG CGCGGCGCCC
GCCGCGCTCG CCGTGTCGCT GCAAGAGCGG CCGTGGTTCA ACCCGGGGCT CGACGATCGA
TGGTTCTTCA TCCCGGGCGT GATCGGCACG CTGACGCTGA TCCAGGTCGT GAGCCTCACC
GCGTTCGCGG TCGTGCGCGA GCGCGAGGTC GGCACGCTCG AGCAGATCAT GGTGAGCCCG
ATCCGCCCCG TCGAGTTCAT TCTCGGCAAG ACGGTGCCGT TCTTCCTGAT CGGGCTCGGC
GACGTCGCGC TCGTCGCGGC GATCGGCATC GTCTGGTTCC ACGTGCCGTT CGTCGGCGAC
TGGCTCGTCA TGCTGCTCGG CGTCACGCTG TTCCTGCTCG CGACGCTCGG CTTCGGGCTG
CTGCTGTCGA CGTTCTCGCG CACGCAGCAG CAGGCGTTCG CGCTCAATTT CTTTCTCGTC
AATCCGATCT TCATCCTGTC CGGCTTCGCG TTTCCGATCG CCGCGATGCC GCGCGTGCTG
CAATGGCTGA CGTATCTGAA TCCGCTGCGC TATTTCCTTG TCGTGATTCG CGCGCAGTTC
CTGAGCGGCG CGGGGCTGGC CGTGCTGTGG CCGCAGCTCG CGGCCATGGC GCTCCTTGGC
GTCGCGATGC TTGCGCTCAG CGTGCTGCGC TTCAGGAAAT CGCTCGATTA G
 
Protein sequence
MFDRVQSMLV KELLQLKRDR WALIRLFVPL VVQVIVYGYA ATFTVNHVAT ALLDLDRSDA 
SRDLVSHFVA TGRFDIVDVA ASDDAIRRDI DGGRAEFAIV IHAGFSQFLG NGRTAPLQVI
VDGTNSNTAL IALGYASQIV ARFQADRASR AWPASAGAAP AALAVSLQER PWFNPGLDDR
WFFIPGVIGT LTLIQVVSLT AFAVVREREV GTLEQIMVSP IRPVEFILGK TVPFFLIGLG
DVALVAAIGI VWFHVPFVGD WLVMLLGVTL FLLATLGFGL LLSTFSRTQQ QAFALNFFLV
NPIFILSGFA FPIAAMPRVL QWLTYLNPLR YFLVVIRAQF LSGAGLAVLW PQLAAMALLG
VAMLALSVLR FRKSLD