| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BTH_II1293 |
|---|
| Symbol | |
|---|
| ID | 3846391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia thailandensis E264 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007650 |
|---|
| Strand | + |
|---|
| Start bp | 1541857 |
|---|
| End bp | 1542909 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 637838595 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_439489 |
|---|
| Protein GI | 83718323 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.906267 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCG CGACGATACC GCCCGCGCGC GGCACGCCGG GCGCGCCGCG CGCCGCCGAG
GCAAGCGCGC GCGCGGGCGC GGCGCGGCCC GACGCGCACG CCGTCGTCGT CGCGCGCGGG
TTGACGAAGC GCTTCGGCGC GTTCACCGCG GTCGACGCGC TCGATCTGTC GATCGCGCGC
GGCGAGGTCG TCGGCTTCAT CGGCCCGAAC GGCGCGGGCA AATCGACGAC GATCCGGCTG
TTGTGCGGGC TGTTCGCGCC GAGCGCCGGC AGCGCGACGG TCGCCGGCTT CGACGTGGGC
ACGCAGGCCG AGGCGGTGCG CGCGCACATC GGCTACATGT CGCAGAAATT CTCGCTGTAC
GGCGATCTGT CGTGCCGCGA GAACCTGCGC TTCTTCGCGG GCATCTACCA GGTGCCGCGC
GACATACGCG ACGCGCGCAT CCGCTTCGCG ATCGAGATGG CCGGGCTCGA AGGGCGCGAG
GATGCGCTCG TGAGCACGCT CGCGGGCGGC TGGCGGCAAC GGCTCGCGCT CGGCTGCGCG
ATCCTGCATC GGCCGCCCGT GCTGTTTCTC GACGAGCCCA CCTCCGGCGT CGAGCCGCAG
GCGCGCCGGC GCTTCTGGGA TCTGATCCAC GGGCTCGCGG CCGACGGCGT GACGGTGCTC
GTGTCGACGC ATTACATGGA CGAGGCCGAG TACTGCAACC GGATCGCACT GATCGACGCG
GGCCGGCTGA TCGCGCTCGG CAGCCCGCAA GCGTTGCGCG AGCGCGAGCT GGGCGGCGCG
CTGTTCGAGC TCGCGTGCGC GCCGCTCGGC GAGGCGGTCA CCGTGCTGCG CGGCGCGCGC
GGCGTCATCG ACGCGTCGAT CTTCGGCGAC CGGCTGCACG TGCTCGTCGC GCGCGACATG
CCGGCGCTCG CGCTGCGCGA CGCGCTCGCC GCCGCGCGCA TCGACGCGGG CGAGCCGCAG
CCGGTCCGCC CGAGCCTCGA GGACGTGTTC GTGCGGCTCG TCGCGCGCGC CGACGAACGC
AAGCGGAGCG AACCATGCGC ATCCGGCGGC TGA
|
|---|
| Protein sequence | MTRATIPPAR GTPGAPRAAE ASARAGAARP DAHAVVVARG LTKRFGAFTA VDALDLSIAR
GEVVGFIGPN GAGKSTTIRL LCGLFAPSAG SATVAGFDVG TQAEAVRAHI GYMSQKFSLY
GDLSCRENLR FFAGIYQVPR DIRDARIRFA IEMAGLEGRE DALVSTLAGG WRQRLALGCA
ILHRPPVLFL DEPTSGVEPQ ARRRFWDLIH GLAADGVTVL VSTHYMDEAE YCNRIALIDA
GRLIALGSPQ ALRERELGGA LFELACAPLG EAVTVLRGAR GVIDASIFGD RLHVLVARDM
PALALRDALA AARIDAGEPQ PVRPSLEDVF VRLVARADER KRSEPCASGG
|
|---|
| |