Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BTH_II1286 |
Symbol | |
ID | 3846399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia thailandensis E264 |
Kingdom | Bacteria |
Replicon accession | NC_007650 |
Strand | - |
Start bp | 1530903 |
End bp | 1532534 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637838588 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_439482 |
Protein GI | 83718331 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.556611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCGCT TCCCTCACGA TACGGCGGCG GTCCCGCGCC GTTGCCGCCG CCGCGCGCGC GGCGCTGCCC GCGCTTCGTG CGCCGCGTGC GCGTCGATCG CGCGCACGGC GGTTCGCGCC GCCGCCGTCG CGGCCGCCCT CTTCGCCGCG GGCTGCACGC TCGCGCCGCG CTACGAGCGT CCGGCCGCGC CCGTGTCGGG CGCGTTCCCG ACCGACGGCG TCTACGCCGC GCAGCCGGGC GCCGCGGCCG GCGCGCGCAG CGCGAACGGC CAGGCGGCCG TCGACATCGG CTGGCGCGAG TTCTTCGTCG ATCCGCGCCT GCAGCGGCTG ATCGAGATCG CGCTGAAGAA CAACCGCGAT CTGCGCGTGT CGGTGCTCAA CGTCGAGGCG TCGCGCGCGC AGTATCGGAT CACGCGCGCG GGCCTGTTCC CGACGCTCGA CGGCACCGGC ACGGGCACGA TCCAGCGCAC GCCGGCCGGT GTGTCGGTAA CCGGCCAGCC GCTCATCTCG CGGACCTACA ATGTCGGCGT GTCCGCGTCG TGGGAGCTCG ACCTGTTCGG CCGCGTGCAG AGCCTGAAGG ATCAGGCGCT CGCGCAATAC TTCGCGACCG CGCAGGCGCG CAAGGCCGCG GAGATCTCGC TCGTCGCGAG CGTCGCCGAT CAGTATCTGA CGCTGCTGTC GACCGACGAT CTGCTGCAGA TCACGGAGAA CACGCTGAAG ACGGCGCGCG CGTCGTACGA CCTGACGAAG CTGCAGTTCG ACAACGGCAC CGGCTCGGAG CTCGATCTGC GGCAGGCGCA GACGGTCGTC GAGACCGCGC TCGCGAACCA GCAGGCGCAG GCGCGCGCCC GCGCGCAGGC GGTCAACGCG CTCGTGCTGC TGATCGGCGA GCCGCTGCCC GACGATCTGC CGGCCGGCCT GCCGCTCAAT GCGCAGAATC TGCTGACCGA CATCCCGGCC GGGCTGCCGT CCGATCTGCT GACGCGCCGC CCCGACATCA TGCAGGCCGA GGAGACGCTG CGCGCGGCGA ACGCGAACAT CGGCGCGGCG CGTGCGGCGT TCTTCCCGAA AATCTCGCTC ACCGGCGCGT TCGGCACCGC GAGCCCGACG CTCGGCGGCC TGTTCAAGGC GGGCACGGCG GCGTGGTCGT TCGCGCCGAG CATCGCGCTG CCGATCTTCG AGGGCGGACA GAACATCGCC AATCTCGATC TCGCGCACGT GCAGAAGCGC ATCGAGATCG CGAACTACGA GAAGGCGATC CAGAGCGCGT TCCGCGAGGT GTCGGACGGG CTTGCCGCGC GCGGCACGTA CGATCAGCAG ATCGCGGCGC TCGAGCGCAA CGAGCACGCG CAGCAGCGCC GCTACGATCT GTCGGACCTG CGCTACAAGA ACGGCGTCGA CAGTTATCTG TCGGTGCTGA CCGCGCAGAC GGATCTGTAT TCGGCGCAGC AGCAACTGAT CAGCGCGCGG CTCGCGCGCT GGACGAACCT CGTCGATCTG TATCGCGCGC TGGGCGGCGG CTGGATCGAA CGCGCGGGCG AGACGCCGCG CCCGGCGGAT GCGCCTGTCG ACTACGGCAA GGCGGCAGCG CCTGCGCCGG CGTCGGCGCG AACAGCGGCC GAGATTGGTT GA
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Protein sequence | MHRFPHDTAA VPRRCRRRAR GAARASCAAC ASIARTAVRA AAVAAALFAA GCTLAPRYER PAAPVSGAFP TDGVYAAQPG AAAGARSANG QAAVDIGWRE FFVDPRLQRL IEIALKNNRD LRVSVLNVEA SRAQYRITRA GLFPTLDGTG TGTIQRTPAG VSVTGQPLIS RTYNVGVSAS WELDLFGRVQ SLKDQALAQY FATAQARKAA EISLVASVAD QYLTLLSTDD LLQITENTLK TARASYDLTK LQFDNGTGSE LDLRQAQTVV ETALANQQAQ ARARAQAVNA LVLLIGEPLP DDLPAGLPLN AQNLLTDIPA GLPSDLLTRR PDIMQAEETL RAANANIGAA RAAFFPKISL TGAFGTASPT LGGLFKAGTA AWSFAPSIAL PIFEGGQNIA NLDLAHVQKR IEIANYEKAI QSAFREVSDG LAARGTYDQQ IAALERNEHA QQRRYDLSDL RYKNGVDSYL SVLTAQTDLY SAQQQLISAR LARWTNLVDL YRALGGGWIE RAGETPRPAD APVDYGKAAA PAPASARTAA EIG
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